Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01409 ATGCTACAATGGCTAAACTTGAATGGCAGAAACAAATTTCTACCATTTATGGGAATGATTATAGCTGTTTTAGCACAAAGTGGAAGCTTTGTTGTAATTAAACTTGCAACAAAAGATGGAATTAACAAATATGTAATGGTTGTTTATTCCATGGCACTTTCCACCATCTTGCTTCTTCCAATTGCTTTCTTTAACAACAGGTCACAGTGTCCTCCTCTCTCCTTCTCTTTACTTGGCAGCTTCTTCTTCCTTGCTCTCCTAGGAACTTCAGGACAGATAATGACTTATGGAGGCATAGAACTTAGTTCACCTACTCTTGCATCAGCAATGCTTAACCTCATTCCAGCTTTCACTTTCGTGCTTGCTCTCATTTTCAGGATTGAAAAAATAAATTGGAGACATTATAGCAGCCAAGCTAAAGTGATAGGAACTATAGCATCAATGGGTGGAGCATTTGTTGTCATATTGTACAAAGGTCCACCACTCTTTAACATACATTCATCAAGTTCTTACAACTCACTTCAATTTTCACCAAACTTCAACTGGATTTTGGGAGGTTTGTTAAATGCTGGGGATTCATTAGTTTCATCCATGTGGTACATATATCAGGTTTCATTAACAAAGAAATACCCTGCTGTAATAGTCATAGTCTTCTTTCAAGTACTTTTCACAACAATTCAATCCGGAGTATATGCTTTAATTGTGGTTAGAGATCCAAGTGCATGGGAACTTAAGCTTGATATGGGGCTGGTTGTCATTTTTTACCAGGCAATAGGTGCAATAGGAGTTCGATATTGCTTACAAACATGGTGCGTACAAAGAGCTGGTCCTCTATTTTGTGCAATGTTCAAACCAATAGGAATCATATTCACTGTTTTCTTGGGTTTTATTTTTCTTGGAGATGACTTTTATCTTGGAAGTTTGATTGGTGCGATTATAATAGTGGTAGGATTTTATGCCGTGCAATGGGGGAAAGCTTCAGAAGAGAAAGTTGAGAGAGGGATTGAAAACTTAGAGATGCCGTGCAATGATGTTCCATTGTTACAAAATAAAACATGA 1059 0.3739 MLQWLNLNGRNKFLPFMGMIIAVLAQSGSFVVIKLATKDGINKYVMVVYSMALSTILLLPIAFFNNRSQCPPLSFSLLGSFFFLALLGTSGQIMTYGGIELSSPTLASAMLNLIPAFTFVLALIFRIEKINWRHYSSQAKVIGTIASMGGAFVVILYKGPPLFNIHSSSSYNSLQFSPNFNWILGGLLNAGDSLVSSMWYIYQVSLTKKYPAVIVIVFFQVLFTTIQSGVYALIVVRDPSAWELKLDMGLVVIFYQAIGAIGVRYCLQTWCVQRAGPLFCAMFKPIGIIFTVFLGFIFLGDDFYLGSLIGAIIIVVGFYAVQWGKASEEKVERGIENLEMPCNDVPLLQNKT 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01409 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 157 - -
Vivi2g01409 352 PANTHER WAT1-RELATED PROTEIN 14 332 IPR030184 GO:0016020|GO:0022857
Vivi2g01409 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 326 - -
Vivi2g01409 352 Pfam EamA-like transporter family 18 155 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01409 Vivi-Chr2 60493472 60533398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01409 14 332 Nodulin-like Gene Family AT5G40240 40.729 6.92e-71 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01409 - - tpra:123906754 543.502