Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01407 ATGGTGATTGAAGGAGCAGGTGTAACAGCAGCCATGGTTACAGTTCAAATCCTGGAAGTTGGTGGTGACACACTAATGAAATCAGCAACTAAAGATGGAATGAGTAGTTTCATTTTCACTGTTTACTCAAACCTTCTTGCTCTATGTTTCCTTCTACCATCCACTCTTTTCTACCATAGAAAAAGAGCTCCTCCTCCAATTTCAACATCAATTTTCTGCAGAATGGTTCTTCTTAGTTGCATCCAAGCTTCAGTGCAGATTTTGATGAACACTGGAATTAGATATAGCTCTCCCACTTTGTCATCAGCTATGGTTGATCTTGTCCCTGCTTTTACCTTCATACTTGCTTTGATTTCAAGGATGGAAATTCTAAATTTGAAACAACATAGTAGTCAGGCAAAAGTTATTGGTACAATGACCTGCATTGCAGGAGCATTAATTGTGACATTATATAAAGGGATGCCATTGATTAGTGATTCTTTTCAAAATATAAAAATGGGAGCAAGTGGACTTAACATCTCAGAAAAATCAGATTGGATAGTTGGGGCTTTTCTTCTTGCAACCGCTAGCTTTTGCCTTTCACTTTTACATATAGTCGAGAATTGGATTATCAAGGAATATCAAGAAGCGCTAGTGGTAACAACTATTTGTTGTTTTTTTGTGGCAATCCTATCTTCCATTGTAGCTTTCATTGCGGAGGGTATTTCAAAAGCTTGGATACTCAAACTTCATAAGGAGTTCATATCTGTCTCTTACTCAGCAATACTTGTGGTGTCAACGAGGAATTTTGTAACCATATGGGCATGTCGTAAGAAAGGACCAATATACGTAGCTATATTCAAACCATTAAGAGTTGTTGTTGCACTTGGCATGGGAGTATTATTTCTTGGAGACAATCTTTATCTTGGAAGCATGATTGGAGCTGCTATTATAATTATTGGATTTTATGGTGTAATGTGGGCACTTGCTCAAGAGAAACAAATGACAAGTGAAAGTAATATTTTTCCATCTTCTTCCACGCCTCTTATGTCCAACAAAAGCATGGATAACTAG 1053 0.3732 MVIEGAGVTAAMVTVQILEVGGDTLMKSATKDGMSSFIFTVYSNLLALCFLLPSTLFYHRKRAPPPISTSIFCRMVLLSCIQASVQILMNTGIRYSSPTLSSAMVDLVPAFTFILALISRMEILNLKQHSSQAKVIGTMTCIAGALIVTLYKGMPLISDSFQNIKMGASGLNISEKSDWIVGAFLLATASFCLSLLHIVENWIIKEYQEALVVTTICCFFVAILSSIVAFIAEGISKAWILKLHKEFISVSYSAILVVSTRNFVTIWACRKKGPIYVAIFKPLRVVVALGMGVLFLGDNLYLGSMIGAAIIIIGFYGVMWALAQEKQMTSESNIFPSSSTPLMSNKSMDN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01407 350 Pfam EamA-like transporter family 24 149 IPR000620 GO:0016020
Vivi2g01407 350 Pfam EamA-like transporter family 182 319 IPR000620 GO:0016020
Vivi2g01407 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 152 - -
Vivi2g01407 350 PANTHER WAT1-RELATED PROTEIN 9 331 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01407 Vivi-Chr2 60473768 60484123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01407 11 333 Nodulin-like Gene Family AT3G28050 42.202 4.46e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01407 - - gmx:100793168 404.06