Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01406 ATGGTGAGCGAAGGAGCAATTGTAACAGCAGCAATGGTTACAGTTCAGTTCCTCGAAATGGGTGGTAACACTCTTATCAAAGCAGCCACCAACGATGGAATGAGTATTTATGTTTTCACTTTTTACTCAAACCTTCTTGCTCTATGTTTCCTTCTACCATCCACTCTTTTCTACCACAGAAAAAGACCTCCTCCTCCAATTTCAACATCAATTTTCTGCAGAATGTTTCTTCTTAGTTGCCTAAGTACTTCAGTGCAGATTTTGATGAACACTGGAATTAGATACAGCTCTCCCACCTTGTCATCTGCTATGGTTGACCTTGTCCCAGCTTTTACTTTCATACTTGCTGTAATTTCAAGGATGGAAAATCTAAATTTAAAACAACATAGCAGCCAAGCTAAAATTATTGGTACAATTGTGTCTATAGCAGGGGCATTAACTGTTACTTTATATAAAGGGATACCATTGATTAGTGATGGTTTTAAAAATATAAAAATGGGAGCAAGTGATATGTATCTGACAGGGCATCCAGAATGGATACTTGGTGCTTTTCTTCTTGCAACTGCTAGCTTTTGCCTTTCTGTTTTATTTATTGTTCAGACTTGGATTATCAGAGATTATCCAGAAGAATTAGTGGTAACAACCATTTGTTGCAGTTTGGTGGTAATCCTATCAGCAATTGTAGCTTTCATTGCAGAGGGAAATTCTAGAGTTTGGATACTGAAACCTGATAAGGAGTTACTAACTATATTTTATTCAGCAATATTTGTGGTGTCAATGAGGAGTGTTGTATATGCATGGGCATTCCGTAAGAAAGGACCAATATATGTAGCTATGTTCAATCCTTTAGGAATGGTCATTGCACTTGCTATGGGACTAATATTTTTGGGAGACAATCTTTATCTTGGAAGCATGATTGGAGCTGCTATAATAGCCATTGGATTTTATGCTGTGATGTGGGCACAAGCTCAAGAGGAACACAAAACATGTCAAAATAATATTTCCACATCCTCTTTGGCCCCTCTTTTGTCTGATTGA 1038 0.3748 MVSEGAIVTAAMVTVQFLEMGGNTLIKAATNDGMSIYVFTFYSNLLALCFLLPSTLFYHRKRPPPPISTSIFCRMFLLSCLSTSVQILMNTGIRYSSPTLSSAMVDLVPAFTFILAVISRMENLNLKQHSSQAKIIGTIVSIAGALTVTLYKGIPLISDGFKNIKMGASDMYLTGHPEWILGAFLLATASFCLSVLFIVQTWIIRDYPEELVVTTICCSLVVILSAIVAFIAEGNSRVWILKPDKELLTIFYSAIFVVSMRSVVYAWAFRKKGPIYVAMFNPLGMVIALAMGLIFLGDNLYLGSMIGAAIIAIGFYAVMWAQAQEEHKTCQNNISTSSLAPLLSD 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01406 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 323 - -
Vivi2g01406 345 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020
Vivi2g01406 345 Pfam EamA-like transporter family 22 149 IPR000620 GO:0016020
Vivi2g01406 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 152 - -
Vivi2g01406 345 PANTHER WAT1-RELATED PROTEIN 9 329 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01406 Vivi-Chr2 60417680 60425087 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01406 11 341 Nodulin-like Gene Family AT5G40230 44.311 1.18e-85 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01406 - - gmx:100793168 460.685