Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01386 ATGGCCGCTGCACATGCTTTTTTTGCTCAAGATCAAGGTACAACATTCAATCTGGAGTACGCATGGCGACTGTTAAAAGATGAACCTAAATGGATGCAAGAATCAATTGGAAGTTCTTCAAAAATAACAAAGACTTCTGCTAGTGGGGCATCATCGGAGAACCCAATTACACCTTCAAGTTATGAGTTTAACTCTTCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAACAAAAAGGAAGGGTAAGGCAAATGAAATTCCAACTGCTAAGCAAGATGAAAGGAATAAAATAACAACGACAATGGAAAGACTAGCGCAATGTAAGGAGGACGAGATAGAAGTCAAGGAAGTAAAGCAGCATCAGAAAGGCACATCTAGAGCTGTTTTTCTAAGCCTTATATCCAACGAGAAAAAGAAACAGATTAAGTAG 432 0.3958 MAAAHAFFAQDQGTTFNLEYAWRLLKDEPKWMQESIGSSSKITKTSASGASSENPITPSSYEFNSSSPMERPMGQKATKRKGKANEIPTAKQDERNKITTTMERLAQCKEDEIEVKEVKQHQKGTSRAVFLSLISNEKKKQIK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01386 143 Pfam No apical meristem-associated C-terminal domain 15 121 IPR029466 -
Vivi2g01386 143 MobiDBLite consensus disorder prediction 74 99 - -
Vivi2g01386 143 MobiDBLite consensus disorder prediction 34 72 - -
Vivi2g01386 143 PANTHER - 1 121 - -
Vivi2g01386 143 MobiDBLite consensus disorder prediction 34 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01386 Vivi-Chr2 59269574 59271061 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01386 3 112 Glutathione S-transferase Gene Family AT5G41240 28.814 5.07e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01386 - - vvo:131649128 274.248