Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01361 ATGGAACATATGATTGCAGTTGATGGAACTAGAAGGAAAGTAAAGTACAAATATTGTGTGAAGATTGTCTTAGGAGGTGTTTATGGAACTAGAAGGAAAGTAAAGTACAAATATTGTGTGAAGATTGTCTTAGGAGGTGTTTACCATTTACCATTTGAAGCACCGTTTGACACGGAAGAATTTGTAGCTAAGGTTTCAGATACGCGCACGATGTCTAGGGCTCCCATTCTCATTAAGGAGCTGGTCCAAGGGAACCAGGTGTGGAAAATGCACATCAGGGTCGTTGACCTGTGGGTTGTTACAGAAAAAACAGGGTATCAACACCTAGAGTGTGTTTTACAAGATGGAACGGGTGACCAAATCCATGTGACCATTAGCCGTTGGGATTTTAAAGATTGGATAGAGCAGATCAAAGAGCATGAAACTTATTATCTGTATAATGGGGAGCCTGTGGCTAATGATGGCCCTTTGAAAGTATGTTCGAACCCTCTCAAGATTCTTTTTAATGGAGGCACTACTCTCACCAAGGTGGACATGCCGGACATCCCACCACACAAATTCAACTTCCATGCCATTGAAAACTTTCTCAATGGACATTTCAAGCCTGATATGCTCTATGATGTTATTGGTGTCTTGCAAGATGTTGTTAAGACACAAATGGGGGGTGGGGGTAAGAAGTCCTGTACCAATATCACATTACGTGATGTTGTGGGAAATGCCATTGAAGTTGCTTTATGGGGTGATTTTAGCAAACAATTCATGGACTACAAGACTCTTGGCAAACATGTTGGTCCCACAATTATCATTTTGACTCATGCTTGGTGTAAGCCCAATACAGTATCTGGATTACCAAGTCTATCTAATGCTTGGAATGGCTCGAAACTCCTGATTAACTTAGACCATCCACAAGTGGAAACCTTCAAAACCAGTTTTGGAGCAGCTGATTTGTCAAATGCATCCAACCTTTCTCTATCACTAACTTGTGATTCATCCATTCAATCCACAAACCAGAATTGGACTAGCCGTAATGAGGTCAGGATTATCCGTGACATTTATGAAGGAGAAAAGGATTGTTTTGCAACTACTATTGGAACTACCAAACGATTCAAGGCTTCAAGGTTTGGATGGTTTTTTGAGAGCTGCCCAGGATGTAAGATTTCTATCAAGTCCGTTGGAGGGAAAGTTGAGTGCCACTGTGGAGTTAAAGATGTTGAACCAATTACTAAATTCAAAATAGAAGTTGAAGTTGAATATGATGGCTTTAATGGAACCTTTGTCTTTAGGGATAAGGATTGTGTCCCATATACTAAACTGTCTGCTAAAGAGTTAAGAAAGCTCATGATAGCGAATGGAGAAGACAACCCAAAAATATGGCCGGCTCAAGTTGACAATTTGTTGAATAAGGAAATGGCGTTCCGTATCAAATTTCAATCATCTTACAAACAGTATTCAATTGTGACAATTCTTAATGAGGATAATGTTTACAACAAACTTAAGGGATACCTAACCCCGGATGAGGAGCATACATCAAATGCTCCTGTTTTGGAGATCTCCAATTCTGATCCAAATCATGAGCCAACTGAACCTATTGTAAGGGCCTAA 1602 0.4014 MEHMIAVDGTRRKVKYKYCVKIVLGGVYGTRRKVKYKYCVKIVLGGVYHLPFEAPFDTEEFVAKVSDTRTMSRAPILIKELVQGNQVWKMHIRVVDLWVVTEKTGYQHLECVLQDGTGDQIHVTISRWDFKDWIEQIKEHETYYLYNGEPVANDGPLKVCSNPLKILFNGGTTLTKVDMPDIPPHKFNFHAIENFLNGHFKPDMLYDVIGVLQDVVKTQMGGGGKKSCTNITLRDVVGNAIEVALWGDFSKQFMDYKTLGKHVGPTIIILTHAWCKPNTVSGLPSLSNAWNGSKLLINLDHPQVETFKTSFGAADLSNASNLSLSLTCDSSIQSTNQNWTSRNEVRIIRDIYEGEKDCFATTIGTTKRFKASRFGWFFESCPGCKISIKSVGGKVECHCGVKDVEPITKFKIEVEVEYDGFNGTFVFRDKDCVPYTKLSAKELRKLMIANGEDNPKIWPAQVDNLLNKEMAFRIKFQSSYKQYSIVTILNEDNVYNKLKGYLTPDEEHTSNAPVLEISNSDPNHEPTEPIVRA 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01361 533 CDD RPA1_DBD_B_like 207 311 - -
Vivi2g01361 533 SUPERFAMILY Nucleic acid-binding proteins 348 488 IPR012340 -
Vivi2g01361 533 Gene3D - 327 501 IPR012340 -
Vivi2g01361 533 Gene3D - 76 178 IPR012340 -
Vivi2g01361 533 SUPERFAMILY Nucleic acid-binding proteins 187 312 IPR012340 -
Vivi2g01361 533 Gene3D - 180 319 IPR012340 -
Vivi2g01361 533 MobiDBLite consensus disorder prediction 506 533 - -
Vivi2g01361 533 SUPERFAMILY Nucleic acid-binding proteins 77 177 IPR012340 -
Vivi2g01361 533 CDD RPA1_DBD_A_like 89 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01361 Vivi-Chr2 57834883 57838483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01361 62 329 Core DNA Replication Machinery Family AT5G08020 24.150 2.12e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01361 - - vvo:131597380 935.636