Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01295 ATGAAGAAAGCAATCCCTCTCATTTTCTCTCGATGCCTCATCACCTTTGCATTACTATCAGAAACTGTAATGGCAGAATCAAGAGCAAAGACAGTTCTGATAACATGTGGTAATCAACTTGAGCACAACACAACCATCTTCGTTCCGAATTTTGTCGCAACGATGGAGAAAATCAGTGAGCAGATGCGTAGTACCGGCTTCGGCACAGCAGTTACAGGGACAGGACCTGATTCTAACTATGGCCTAGCACAATGCTATGGAGATCTTTCATTACTAGACTGTGTCTTGTGTTATGCCGAGGCACGCACAGTTCTTCCACAGTGCTTCCCTTATAACTCCGGTCGCATTTACCTCGATGGCTGTTTCATGAGGTCTGAGAATTATAGTTTCTTTAATGAGTATCAAGGACAGGGAGATAGAGCTGTGTGTGGGAACACAACTAAGAAGAACTCGGATTTTCGAGCAGCTGCGAAGCAGGCTGTGTTAAGAGCAGTTCAAGATGCAGTGAAAAATAAAGGCTATGCCAGAGGGAAAGTTGTTGTATCAGAAGCAGCAAATGAATCTGCTTATGTTCTAGCTGATTGTTGGAGGAATTTAAACTCTCGGTCTTGCAAAGCATGTCTTGAGCATGCATCGTCGTCTATTTTGAGATGCCTGCCTTCGTCAGAAGGACGAGCACTCAATACCGGATGCTTCATGAGGTACTCCGACACTGATTTTCTGAACAAGGAAGTGGAAAATAGGAGTTCAGGAGGTAATGTACTAGTAATAGTCGTGGCAGTAGTCAGTTCGGTGATCGTTGCGGTGGTTGGAGTAATTATAGGAGCTTATATCTGGAAACAAAGATACATTCAAAAGAAAAGAAGAGGATCAAATGATGCAGAAAAGTTAGCAAAAACTCTTCAAGAAAAAAGCTTGAATTTCAAGTACTCTACATTGGAAAAAGCAACCGAATCTTTTAGTGACAATAATAAGTTAGGGCATGGAGGATTTGGAACGGTTTATAAAGGAGTTCTACCTGATGGAAGAGAGATTGCTATCAAGAGGTTATATTTCAACAATAGACACAGAGCAGCAGATTTCTACAACGAAGTCAACATAATTAGCGGTGTCGAACACAAGAATCTAGTTAGACTATTAGGATGCAGTTGCTCAGGACCTGAAAGCCTGCTTGTTTATGAATATATGCACAACAGAAGTCTCGATCGCTTCATTTTTGATAAAAACAAGGGAAGAGAACTAAAATGGGAAAAGAGATATGAAATAATTGTCGGGACAGCTGAAGGATTAGTTTACCTGCATGAGAACTCCAAAATCAGGATAATTCATAGAGATATAAAAGCCAGCAACATCCTATTGGATTCAAAGCTTCGAGCTAAAATTGCAGATTTTGGTTTGGCCAGGTCCTTTCAAGAAGACAAAAGCCACATAAGTACAGCTATTGCAGGAACTTTGGGGTATATGGCTCCAGAGTATCTAGCTCACGGTCAATTAACAGAAAAAGCGGACGTATATAGTTTCGGAGTGTTGCTGCTAGAGATAGTTACTGGAAGACAGAACAACAGGAGCAAAGCATCAGAATATTCAGACAGCTTAGTTATAGTGGCATGGAAGCATTTTCAGTCTGGGGCTTCCGAACAACTATTTGATCCAAATATAGAGTTGCGCGATGATCACAATAGTGATGTTAAGAATGAGCTTTTAAGAGTGGTTCACATAGGACTTCTATGCACTCAAGAAGTCCCTTCATTACGACCAACTATGTCAAAGGCATTACAGATGCTAACCAAGAGTGAAGAGCCTCTTGTAGCTCCCTCGAATCCGCCCTTCCTAGATGAGAGTACTATGGAACTCCATGACACAAGTGGTGACCCGTTTTACCTCCCCAATGCAACTGATTCAATTGCTACTATGTCTCATAGCTCTTTCTATCCTAGATGA 1941 0.4142 MKKAIPLIFSRCLITFALLSETVMAESRAKTVLITCGNQLEHNTTIFVPNFVATMEKISEQMRSTGFGTAVTGTGPDSNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPYNSGRIYLDGCFMRSENYSFFNEYQGQGDRAVCGNTTKKNSDFRAAAKQAVLRAVQDAVKNKGYARGKVVVSEAANESAYVLADCWRNLNSRSCKACLEHASSSILRCLPSSEGRALNTGCFMRYSDTDFLNKEVENRSSGGNVLVIVVAVVSSVIVAVVGVIIGAYIWKQRYIQKKRRGSNDAEKLAKTLQEKSLNFKYSTLEKATESFSDNNKLGHGGFGTVYKGVLPDGREIAIKRLYFNNRHRAADFYNEVNIISGVEHKNLVRLLGCSCSGPESLLVYEYMHNRSLDRFIFDKNKGRELKWEKRYEIIVGTAEGLVYLHENSKIRIIHRDIKASNILLDSKLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEIVTGRQNNRSKASEYSDSLVIVAWKHFQSGASEQLFDPNIELRDDHNSDVKNELLRVVHIGLLCTQEVPSLRPTMSKALQMLTKSEEPLVAPSNPPFLDESTMELHDTSGDPFYLPNATDSIATMSHSSFYPR 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01295 646 Gene3D - 28 130 IPR038408 -
Vivi2g01295 646 Gene3D - 140 240 IPR038408 -
Vivi2g01295 646 ProSiteProfiles Gnk2-homologous domain profile. 29 130 IPR002902 -
Vivi2g01295 646 ProSiteProfiles Gnk2-homologous domain profile. 135 240 IPR002902 -
Vivi2g01295 646 ProSiteProfiles Protein kinase domain profile. 320 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g01295 646 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Vivi2g01295 646 Gene3D Phosphorylase Kinase; domain 1 280 395 - -
Vivi2g01295 646 Pfam Protein kinase domain 321 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g01295 646 FunFam Cysteine-rich receptor-like protein kinase 2 396 603 - -
Vivi2g01295 646 SMART serkin_6 320 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g01295 646 FunFam Cysteine-rich receptor-like protein kinase 2 29 130 - -
Vivi2g01295 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Vivi2g01295 646 SUPERFAMILY Protein kinase-like (PK-like) 306 621 IPR011009 -
Vivi2g01295 646 CDD STKc_IRAK 326 597 - -
Vivi2g01295 646 Pfam Salt stress response/antifungal 143 237 IPR002902 -
Vivi2g01295 646 Pfam Salt stress response/antifungal 44 128 IPR002902 -
Vivi2g01295 646 FunFam Cysteine-rich receptor-like protein kinase 3 139 240 - -
Vivi2g01295 646 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 80 619 - -
Vivi2g01295 646 FunFam Putative DUF26-domain receptor-like protein kinase family protein 289 395 - -
Vivi2g01295 646 Gene3D Transferase(Phosphotransferase) domain 1 396 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01295 Vivi-Chr2 55381445 55385699 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01295 5 646 Receptor kinase-like Gene Family AT1G70520 67.647 0.0 866
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g01295 Pkinase 3.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01295 - - gmx:100305420 1085.09