Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01275 ATGAAAATGGCACGGATCATACTTGTGACACTTTTCTTGTTTAACTTGGTTATTGTTCCTTCTATAGCTTTGCCATTTCTTGAGGGCCTTGGATTTGGTATTGGAAATAATGATGATGCACGACATGATAATCAACAAGAAGCACTACCAGTATTTGACGATGGAATCGGAAATGCAAAGGTTGACGATGGATTGGGAACTGGAAAGTTAAATGGAGACGATGGACTGGGAACTGGAAAGTTAATTGGAGACGATGGATTGGGAACTGGAAAGTTAAATGGAGACGATAAGCTAATTGGAAAGGTTGTGGTTGATGGTAGACCTAAACTTAAGGTAGGATTCTATAGCCAAACTTGTCCCAATGCTGAGAAAATCGTTGCTGCAGCACTCGCTGAAAGTGTTAAGATTAATCCAGAGGCAATTGCTCAACTCCTTCGTCTTCAATTTCATGACTGTTTCGTCGTTGGATGTGATGCATCGATCTTGCTAGACTACTCACCAACAGGAGACAAAGTAGAGAAAGGGTCAATGTTCAATGGTCAACTTCTCAAAGGAGCTGACACAGTTGATGACATTAAAGAAAAGCTAGAAGAAGAATGTCCAGGAATAGTGTCATGCTCAGACACGTTAGCATTCTCAATCAGTGAAGGAATGCACCTTGCCGGTTTACCTCGTAGAGCGCCTCTTGGCGGCCGTAGAGATTCGCTCGTTTCTCTCGCATCCATCGCGGAAGACAACAATCTCCCACAGCCTAATTGGTCAATCGAAAGAATGGTTGCACTTTTCATAAAGAAAGGTTTCACAGTTGAAGAAATGGTTATCTTACTGGGTGCACATTCAATTGGTTCGGCTCATTGTGATGTTTTTATGGAAAGAATTTTTAATTACGAAAACACGAGGAAGCCTGACCCTACACTGGCAGATCAAGTTGTTAAAGAGTTTCAAGGTATCTGTAAGAATGCTGGGACACAGCTATTTAGAAACCCAACTGTGAATTTCGATGAGACTCCAACAGAGCTTGATAACTTGTTTTACAAGAATATGGTGACAAAGAACAAGACGGTCTTGGTTACGGATTCTAATTTGATCAATGATCCTAGAACAATTCCTATTGTTAACAAGATGGCGGCTGAGAATGGTTTGTGGCAAAAGAGATTTGCTGAGGCTATGGATAAGATGGGTGCTATGAATGTTCTTACTGGAAATGAGGGTGAAGTGAGGACGACTTGTAGGGCCACTAATAACTAA 1248 0.4135 MKMARIILVTLFLFNLVIVPSIALPFLEGLGFGIGNNDDARHDNQQEALPVFDDGIGNAKVDDGLGTGKLNGDDGLGTGKLIGDDGLGTGKLNGDDKLIGKVVVDGRPKLKVGFYSQTCPNAEKIVAAALAESVKINPEAIAQLLRLQFHDCFVVGCDASILLDYSPTGDKVEKGSMFNGQLLKGADTVDDIKEKLEEECPGIVSCSDTLAFSISEGMHLAGLPRRAPLGGRRDSLVSLASIAEDNNLPQPNWSIERMVALFIKKGFTVEEMVILLGAHSIGSAHCDVFMERIFNYENTRKPDPTLADQVVKEFQGICKNAGTQLFRNPTVNFDETPTELDNLFYKNMVTKNKTVLVTDSNLINDPRTIPIVNKMAAENGLWQKRFAEAMDKMGAMNVLTGNEGEVRTTCRATNN 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01275 415 CDD secretory_peroxidase 109 413 IPR033905 GO:0004601|GO:0042744
Vivi2g01275 415 ProSitePatterns Peroxidases proximal heme-ligand signature. 271 281 IPR019793 -
Vivi2g01275 415 Gene3D Peroxidase, domain 2 249 393 - -
Vivi2g01275 415 FunFam Peroxidase 249 393 - -
Vivi2g01275 415 FunFam Peroxidase 113 256 - -
Vivi2g01275 415 ProSiteProfiles Plant heme peroxidase family profile. 109 414 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi2g01275 415 SUPERFAMILY Heme-dependent peroxidases 110 414 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi2g01275 415 PRINTS Plant peroxidase signature 119 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi2g01275 415 PRINTS Plant peroxidase signature 184 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi2g01275 415 PRINTS Plant peroxidase signature 348 365 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi2g01275 415 PRINTS Plant peroxidase signature 203 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi2g01275 415 PRINTS Plant peroxidase signature 222 237 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi2g01275 415 PRINTS Plant peroxidase signature 270 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi2g01275 415 PRINTS Plant peroxidase signature 143 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi2g01275 415 PRINTS Plant peroxidase signature 388 401 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi2g01275 415 PRINTS Haem peroxidase superfamily signature 271 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi2g01275 415 PRINTS Haem peroxidase superfamily signature 333 348 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi2g01275 415 PRINTS Haem peroxidase superfamily signature 204 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi2g01275 415 PRINTS Haem peroxidase superfamily signature 141 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi2g01275 415 PRINTS Haem peroxidase superfamily signature 222 234 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi2g01275 415 Gene3D - 113 414 - -
Vivi2g01275 415 Pfam Peroxidase 127 377 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi2g01275 415 PANTHER - 109 414 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01275 Vivi-Chr2 54088790 54090533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01275 109 414 Peroxidase AT5G17820 39.216 2.67e-69 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01275 K00430 - gmx:100783807 399.438