Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01236 ATGTTGCCATCAATGCAAAGTTGTGTTGGCTCTTTACCTCTATTATTGCCAGCTAGTTGTACTAGTCAGACTCAAGAACGAATTAAGCATTTCAGTCCAAACATAGTTGGTATGCAGCCCTTACCTTATAGAATTACAAAAGGAAAACTTCGGACTGCAACTTTTCGAAGTTCATCATCTCGGTTCAAATGCGGTGCTGCGATGAATGTTACATGCTATGCTGCTGGTGCAACCCAAACTGTAACCCGCGATGCTCGGACAATTACGGTTACTCCTGACAAGGTGAAGAACCCTAGACTTGATGACAATGGGCCTGGATTGCCACCTCGCGACGATGACGGCAATGGTGGTAATGGAGGCGGTGGCGGTGGTAATTTTTCAGGTGGACTAGCCCTTTTGGGTATTCTTGGTGTCCTAGACATTCTTAAAGACATAGAGGGTGAATTGCAAAGCAAAGTCAAAGAAAGAAGCTTTGATCAAGCTTGA 486 0.4465 MLPSMQSCVGSLPLLLPASCTSQTQERIKHFSPNIVGMQPLPYRITKGKLRTATFRSSSSRFKCGAAMNVTCYAAGATQTVTRDARTITVTPDKVKNPRLDDNGPGLPPRDDDGNGGNGGGGGGNFSGGLALLGILGVLDILKDIEGELQSKVKERSFDQA 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01236 161 PANTHER PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIAL 4 155 IPR040299 -
Vivi2g01236 161 MobiDBLite consensus disorder prediction 92 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01236 Vivi-Chr2 51318354 51322940 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01236 64 148 C2H2 Transcription Factor Family AT1G56200 55.172 2.51e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01236 - K06855 vun:114190014 106.301