Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01222 ATGTTCCTGCATTTGACAGATGAACTATGGGCAATGAAACTGGGTTTGAAGCTTCTTCATGAAAGGGCAAAACTTGAATCTTTTTGGTGGCCATACATCAGTAATCTCCCAGAAACATTCTCTCTTCCTATCTTTTTTCCTGGGGAAGACATCAAGAATTTGCAGTATGCTCCTGTTCTTCACCAGGTCAACAAAAGATGCCGATTTCTTCTTGATTTTGAGCAACAAGTCAAACGTGCGTTAGTTGGTGTTAAACCAGATAAGCATCCTTTTGGTGGTCAAGAAGTGGATGCTTCATCTCTGGGATGGGCGATGTCGGCAGTTTCATCTAGAGCATTCAAGTTACATGGTAACAAGAATTCAAATGGGATAAACTTTGATATACCTATGATGCTTCCTCTAATTGACATGTGTAATCATAGTTTCAATCCAAATGCTAGAATTGTTCAGGAACAAGAAAGTGGTAGCAGTAACATGCGGGTGAAGGTTGTGGCTGAGAAAGTAATCAAGGAAGATGATCCTTTATTACTGTGCTATGGATGTTTAAACAACGATCTTTTCCTTCTTGATTATGGATTCGTGATACAATCAAACCCTTATGACTGTATCGAGCTCAGATATGACGGTGCTCTTTTGGAGGCTGCAAGCATGGCAGCTGGAGTTTCTTCACCAAACTTCTCGACACCTGCTCCATGGCAGGAACTTATTTTATCACAGCTAAATCTTGCTGGAGAAGCTCCTGATCTCAAGGTGAGCATCGGTGGTCAAGAAATAATCGAAGGCCGTTTATTGGCTGCACTGAGAGTACTCCTCGCAACTGATAAAGAAACTGTACAGAAGTATGACCTCAACACACTCAAGTCTTTAGATGCTGAGGCTCCTCTGGGTGTTGCAAATGACATAGCTGTATTTCGTACATTGATCGCTCTCTGTGTCGTTGCATTGGGACACTTTCCCACCAAATTAATGGATGATGAATCTTTATTGAAGCAGGGTGCTTCAGGTTCAACAGAGTTAGCCATTCAGTTCAGAATCCAAAAGAAGTCTATAATTATAGATGTTATGAAAAATCTTGCTAGGAAGGTAAAGGTTCTTTCATCAAATGAGACAGTTACTGCTGAAGGCTAA 1128 0.4096 MFLHLTDELWAMKLGLKLLHERAKLESFWWPYISNLPETFSLPIFFPGEDIKNLQYAPVLHQVNKRCRFLLDFEQQVKRALVGVKPDKHPFGGQEVDASSLGWAMSAVSSRAFKLHGNKNSNGINFDIPMMLPLIDMCNHSFNPNARIVQEQESGSSNMRVKVVAEKVIKEDDPLLLCYGCLNNDLFLLDYGFVIQSNPYDCIELRYDGALLEAASMAAGVSSPNFSTPAPWQELILSQLNLAGEAPDLKVSIGGQEIIEGRLLAALRVLLATDKETVQKYDLNTLKSLDAEAPLGVANDIAVFRTLIALCVVALGHFPTKLMDDESLLKQGASGSTELAIQFRIQKKSIIIDVMKNLARKVKVLSSNETVTAEG 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01222 375 Gene3D set domain protein methyltransferase, domain 1 4 194 - -
Vivi2g01222 375 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 190 369 IPR036464 -
Vivi2g01222 375 Gene3D - 230 371 IPR036464 -
Vivi2g01222 375 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 12 337 - -
Vivi2g01222 375 FunFam SET domain containing protein 216 369 - -
Vivi2g01222 375 Pfam SET domain 18 180 IPR001214 GO:0005515
Vivi2g01222 375 Pfam Rubisco LSMT substrate-binding 230 351 IPR015353 -
Vivi2g01222 375 SUPERFAMILY SET domain 4 198 IPR046341 -
Vivi2g01222 375 FunFam Histone-lysine N-methyltransferase setd3 2 193 - -
Vivi2g01222 375 CDD SET_LSMT 10 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01222 Vivi-Chr2 50920647 50923736 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi2g01222 SET 5.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01222 - - gmx:100813630 627.476