Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01193 ATGAGAACCCAACGCCCTCACCAACTCTTCCTATTATCCATCATCATCTTCGCATCTACATTCTCATATCTCCAACCAGTAACCGCCACCGGAGAACAACCTCCGACCACCGGAACCACCGGCGACACCGAATTCATCCGTTCAAGCTGCAACACAACACTCTACCCTGACATATGCTACACTTCCCTCTCTCGTTACGCCAATGCAGTCCAACAGAATCCCGGCCAACTCGCTCGCATCGCCATCGCCGTAAGCTTCTCCAAAGTCCACCGCACCGCCTCCTACCTCTCCAACCTCACTCGCGTCGCCGATTACGGCGGAAACTCCCGCGCTGCTCTCGCTCTCCACGATTGCTTCTCAAACCTCAACGACGCGGTGGATGAAATTCGCGGCTCGATTAAACAGATGCGCCAGATAGGAGCCGCCGGCAATTCCGCCGGCGCCGATTCGTTTCTTTTTCAGATGAGTAACGTCCAGACGTGGATGAGCGCGGCGCTTACCGATGAAGAAACGTGTACCGATGGATTTCAAGATGTGGAGAATTGTCCGATGAAAACGGACGTTAACGATCGTGTGACGAAGGTGAAGAAGTTCACGAGCAATGCTTTGGCGTTGGTTAACGGTTACGCCAGTAAAGGAATGCCGTGA 648 0.5355 MRTQRPHQLFLLSIIIFASTFSYLQPVTATGEQPPTTGTTGDTEFIRSSCNTTLYPDICYTSLSRYANAVQQNPGQLARIAIAVSFSKVHRTASYLSNLTRVADYGGNSRAALALHDCFSNLNDAVDEIRGSIKQMRQIGAAGNSAGADSFLFQMSNVQTWMSAALTDEETCTDGFQDVENCPMKTDVNDRVTKVKKFTSNALALVNGYASKGMP 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01193 215 Pfam Plant invertase/pectin methylesterase inhibitor 45 205 IPR006501 GO:0004857
Vivi2g01193 215 CDD PMEI-like_3 48 211 - -
Vivi2g01193 215 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 207 IPR035513 -
Vivi2g01193 215 FunFam Pectin methylesterase inhibitor 1 41 209 - -
Vivi2g01193 215 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 209 IPR035513 -
Vivi2g01193 215 NCBIfam pectinesterase inhibitor domain 12 209 IPR006501 GO:0004857
Vivi2g01193 215 SMART PMEI_2 41 205 IPR006501 GO:0004857
Vivi2g01193 215 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01193 Vivi-Chr2 50528837 50529933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01193 2 208 Carbohydrate Esterase AT5G53370 24.883 1.31e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01193 - - cam:101503417 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g01193 2 50528837 50529933 Vivi2g01193 2 50528837 50529933 ECH