Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01144 ATGGCTGAAAGCTTTGACAGTGCTAGTGCTACATCTAATCTTCTATGTTCTGAAAACAATAGCACATGCTTTGATGATGATTTGGAATGCAATGGTGTTGTTGAAGGTTCTGGAATCTCAACTTCATGGGACCACATGAACCTTAACTTGGACAACTTGGACAACGTTGGATCGGAATCATTTGTGTGTTTTGTTGCACAGAGTGAGGAAATTGTGAGGGTTATGGTTGAGAAAGAAATGGAACATTTGCCTAGAGAGGATTACTTGATGAGATTGCGTAGTGGTGACTTGGATTTGAGTGTTAGGAGAGAGGCTCTTGATTGGATTTGGAAGGCTCATGCTTACTATGGATTTGGACCTTTGAGTCTTTGCTTATCGGTGAACTACTTGGATCGGTTCTTATCGGCTTATCAATTACCGAGAGGTGTGAGTTGGACTGTGCAATTGTTAGCTGTGGCTTGTTTTTCACTCGCGGCTAAAATGGAAGAAGTTAAAGTGCCGCATTGCATAGATTTACAGGTTGGAGAACCGAGATTCGTGTTCCAAGCTAAAACAATTCAAAGAATGGAACTAATGATATTAAGCACATTAGGATGGAAAATGCATGCTTTAACTCCTTGTTCCTTTATAGACTACTTCATATCTAAGATCGGTTGCGAGAATCAATCCGAAAAATCGTCGATTGCAAGATCAGTGCAACTCATCCTTAACATAATCAAGGGTATTGATTTCTTGGAATTCAGACCTTCTGAAATTGCTGCAGGGGTAGCAATTTCTGTTTTAAAGGAACTGCCGGGACAAGAAGCCGATAAAGCCATAGCCGATTTCTTCATTGTAGATAAGGAGAGAGTTCTAAAATGTGTTGAATTGATAAAAGATCTATCATTGATCAAGGTTGGTGCATCTAAGTATACACCATTTGTGCCTCAAAGTCCAATAGGGGTGCTTGATGGAGGGTGCATGAGTTATAAGAGTGATGAGTTAACAAATGGGTCATATCAAAATTCTTTACATAATAGTCCAAATACTAAAAGAAGAAAATTTGATGGACCTTCCAATGGATGA 1065 0.3934 MAESFDSASATSNLLCSENNSTCFDDDLECNGVVEGSGISTSWDHMNLNLDNLDNVGSESFVCFVAQSEEIVRVMVEKEMEHLPREDYLMRLRSGDLDLSVRREALDWIWKAHAYYGFGPLSLCLSVNYLDRFLSAYQLPRGVSWTVQLLAVACFSLAAKMEEVKVPHCIDLQVGEPRFVFQAKTIQRMELMILSTLGWKMHALTPCSFIDYFISKIGCENQSEKSSIARSVQLILNIIKGIDFLEFRPSEIAAGVAISVLKELPGQEADKAIADFFIVDKERVLKCVELIKDLSLIKVGASKYTPFVPQSPIGVLDGGCMSYKSDELTNGSYQNSLHNSPNTKRRKFDGPSNG 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01144 354 PANTHER CYCLINS 64 298 IPR039361 -
Vivi2g01144 354 CDD CYCLIN_AtCycD-like_rpt1 101 199 - -
Vivi2g01144 354 Pfam Cyclin, N-terminal domain 70 201 IPR006671 -
Vivi2g01144 354 ProSitePatterns Cyclins signature. 102 133 IPR006671 -
Vivi2g01144 354 Gene3D - 75 290 - -
Vivi2g01144 354 MobiDBLite consensus disorder prediction 331 354 - -
Vivi2g01144 354 Pfam Cyclin, C-terminal domain 205 302 IPR004367 -
Vivi2g01144 354 CDD CYCLIN_AtCycD-like_rpt2 205 291 - -
Vivi2g01144 354 FunFam D2/4-type cyclin 85 199 - -
Vivi2g01144 354 SMART cyclin_7 107 195 IPR013763 -
Vivi2g01144 354 SUPERFAMILY Cyclin-like 61 202 IPR036915 -
Vivi2g01144 354 Gene3D - 85 202 - -
Vivi2g01144 354 SMART Cyclin_C_2 204 340 IPR004367 -
Vivi2g01144 354 FunFam D6-type cyclin 200 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01144 Vivi-Chr2 46984230 46987017 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01144 13 264 Core Cell Cycle Gene Families AT5G65420 52.362 1.37e-86 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01144 K18810 - gmx:100794010 475.322