LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi2g01125	ATGGCGAGGGAGAAGATTCAGATAAAGAAGATCGAGAACGCAACGGCGAGGCAAGTGACGTTTTCGAAGAGAAGAAGAGGTTTGTTCAAGAAGGCTGAAGAGCTTTCAGTTCTGTGTGATGCTGATGTTGCTCTCATCATTTTTTCTTCTACTGGGAAGCTTTTTGAATACTCCAACTTAAGCATGAGGGAAATACTTGAAAGGCATCATTTGCACTCAAAGAATTTGTCAAAGATGGAAGAACCCTCTCTCGAGCTGCAGCTAGTTGAAAACAGCAACTGTACGAGATTGAACAAGGAAATTGCTGAGAAGAGTCATCAATTAAGGCAGATGAGAGGAGAGGATCTTCAAGGTATGAATGTTGAACAATTGCAACAATTGGAGAGGTCTCTTGAAATTGGCTTGGGACGTATAATAGAAAACAAGGGAGAGAAGATTATGATGGAGATAAATGATCTCCAAAGAAAGGGAAGACAACTGATGGAAGAGAATGATCGACTAAAGCGACATTATATTTTGGCACCTAAGGTGGCGGGCATGATGAATAACGGCAAAATGGTTGGAGGAGTTGAATATGAGAATGTGGTTATTGAAGAAGGTCAATCCTCAGAATCTGTCACTAACGTTTACAACTCCACTGGTCCTCCACAAGACTATGAGAGTTCAGACACATCTCTTAAATTAGGGCTTCCATATGCCGGATGA	705	0.4142	MAREKIQIKKIENATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEYSNLSMREILERHHLHSKNLSKMEEPSLELQLVENSNCTRLNKEIAEKSHQLRQMRGEDLQGMNVEQLQQLERSLEIGLGRIIENKGEKIMMEINDLQRKGRQLMEENDRLKRHYILAPKVAGMMNNGKMVGGVEYENVVIEEGQSSESVTNVYNSTGPPQDYESSDTSLKLGLPYAG	234

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Vivi2g01125	234	PANTHER	SERUM RESPONSE FACTOR HOMOLOG	3	182	-	-
Vivi2g01125	234	ProSiteProfiles	K-box domain profile.	87	183	IPR002487	GO:0003700\|GO:0005634\|GO:0006355
Vivi2g01125	234	PRINTS	MADS domain signature	3	23	IPR002100	GO:0003677\|GO:0046983
Vivi2g01125	234	PRINTS	MADS domain signature	38	59	IPR002100	GO:0003677\|GO:0046983
Vivi2g01125	234	PRINTS	MADS domain signature	23	38	IPR002100	GO:0003677\|GO:0046983
Vivi2g01125	234	ProSiteProfiles	MADS-box domain profile.	1	61	IPR002100	GO:0003677\|GO:0046983
Vivi2g01125	234	SMART	madsneu2	1	60	IPR002100	GO:0003677\|GO:0046983
Vivi2g01125	234	FunFam	Transcription factor, MADS-box	13	83	-	-
Vivi2g01125	234	Pfam	K-box region	92	170	IPR002487	GO:0003700\|GO:0005634\|GO:0006355
Vivi2g01125	234	CDD	MADS_MEF2_like	2	75	IPR033896	GO:0000977\|GO:0045944

Showing 1 to 10 of 18 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi2g01125	Vivi-Chr2	46192291	46196366	Wgd

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi2g01125	1	234	MADS-box Gene Family	AT2G22540	68.333	1.90e-112	320

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MADS-MIKC	Vivi2g01125		K-box	3.5e-16	No_clan

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi2g01125	-		-	gmx:100789126	364.77

Showing 1 to 1 of 1 entries