Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01099 ATGGCTTTTCCTGGTTCCTTGCAACTGTCCCATGGATTGGGCCTTTGCAGGAACCCAAACCCGAGCCCTAACAAAGATATGAGGGTAACAGGGAGATGCAAGTTACAATTATTCAATGAATATCCCTCATGTTCAGTTTTGTTCATGAAACAGGACTACAGGGGTCTTCAACACCTCCGTCATGTAAACAAGTCAACACGTAGATTGTCTTGCAAATCACGATCTTTTAAATGTCATTGTTTTTTAGTGTCAGGCCAACAAATTGTTCCTTCTACTAAGGTGGTTGCTACAGTACTGACAAGGTGCTGTAATGTGTTACAAAATAGTTCAGTCATTGTAAAGTTGATTCCTGCTATTGGCACTATCATTTTTGCAGTATGGGGTGTTGGCCCATTAATGTTTCAGACAAGGAAACTTTGTTTTCAGAAGAGTGATAATAGTTGGAAAAAAAGTACCACTCATTACATAGTAACTTCATACCTTCGACCACTACTATTATGGACTGGAGCCATACTTATTTGCAGATCATTTGAGCCAGTAATTCTACCTACCGAAGCTAGCCAGGCTGTTAAGGAACGACTTTTGAGTTTCGTTAAATCATTGTCGACTGTAGTGGCTTTTGCCTATTGTTTATCAAGTGCAATTCAACAGGCACAAAAATTTGTAACAGAGAATGCAGATGCAAGTGAGACAAGAAATATGGGGTTCCAATTTGCAGGAAAAGCTGTTTATTCTGCTGTATGGATTGCTGCTTTTTCATTGTTTATGGAATTGCTGGGCTTCTCTACCCAAAAATGGGTCACTGCAGGAGGTTTTGGGACAGTTTTGTTGACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCAAGCGCGATGATTCACGCAACTCGGCCTTTTGTTGTAAATGAATGGATTCAAACAAAGATTGAAGGATATGAAGTTTCTGGCACTGTTGAGCATGTTGGCTGGTGGTCCCCAACAATTATACGAGGCGAAGATCGTGAAGCTGTACACATTCCAAACCACAAATTTACAGTGAATGTTGTGCGAAATCTCAGTCAAAAAACACATTGGAGAATCAAAACTCACCTAGCCATTAGTCATTTGGATGTAAATAAGATCAATAACATTGTTGCTGACATGCGGAAAGTATTAGCCAAAAATCCTCAAGTTGAGCAGCAGAAGTTGCACAGGAGAGTGTTTTTGGACAATATAAGCCCTGAAAATCAGGCCCTCATGATTCTGATTTCTTGTTTTGTCAAGACCTCACATTTTGAAGAATATTTGTGTGTTAAGGAAACTATACTATTGGATCTTCTTAGAGTTATCAGCCATCACCGAGCCCGACTTGCAACACCAGTCCGTACCCTACTGAAAGTATATAGTGATGCCGACTTGGACAACATTCCATACGCAGATTCTGGAACAGTTTCTAACCGCCCATTATTAGTGATTGAATCGCCTTACAAAAACAATGCAGATGATAAAACAAAAAGTCGATCAACACGTGCAACTGTTGATCAAGATAACAAGACAACTGTGCAAACCAAACTTGATGCCAAGACAGACAAGGTTGGACCAATAGGAGCACCAGATACCAAAGTTAGAGAAACTCAAGATAACTCTGAGGTGGACACCAAAGTCATGGCATCTATCTCTGATGCAAATGAAAACTTTAAACTTGATTCTGAAGTGGGTGAAAACAAGCCACTGAGATCAAATTTAAACAAGGCAAATATAGAGGTGCCCGAAATGTCTCCTATTTCTTACTCCAAAGTAACTGGTTTAGAATTAGATAATTCATCCCAGAAGGACATCCATGTGAAACAATCTAAGGGTCAGACCATTAAAAACATCAAGGTGAAGGTTGACTCAGACAGTCTAGTTTCCTCATCGACAAACAATATTGACAAAGCCAATGGAAATGTGCCAACAAAACAGGAAGGAGAAAGGAAACCCGCTGCATCCAGGCCTGTTCTTGAAGAAAATATTGTACTCGGCGTTGCATTGGAGGGATCAAAGAGGACACTTCCTATCAATGAGGAGATTGACACAGTGACAACTCAAGAGAACAAGGAAATGGCTGCTTTCCAGGGTGGAAATGGATCTCCAAAGCCTTCAGATGGGAATGTAAAGTAA 2142 0.4029 MAFPGSLQLSHGLGLCRNPNPSPNKDMRVTGRCKLQLFNEYPSCSVLFMKQDYRGLQHLRHVNKSTRRLSCKSRSFKCHCFLVSGQQIVPSTKVVATVLTRCCNVLQNSSVIVKLIPAIGTIIFAVWGVGPLMFQTRKLCFQKSDNSWKKSTTHYIVTSYLRPLLLWTGAILICRSFEPVILPTEASQAVKERLLSFVKSLSTVVAFAYCLSSAIQQAQKFVTENADASETRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGFGTVLLTLAGREIFTNFLSSAMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLDNISPENQALMILISCFVKTSHFEEYLCVKETILLDLLRVISHHRARLATPVRTLLKVYSDADLDNIPYADSGTVSNRPLLVIESPYKNNADDKTKSRSTRATVDQDNKTTVQTKLDAKTDKVGPIGAPDTKVRETQDNSEVDTKVMASISDANENFKLDSEVGENKPLRSNLNKANIEVPEMSPISYSKVTGLELDNSSQKDIHVKQSKGQTIKNIKVKVDSDSLVSSSTNNIDKANGNVPTKQEGERKPAASRPVLEENIVLGVALEGSKRTLPINEEIDTVTTQENKEMAAFQGGNGSPKPSDGNVK 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01099 713 MobiDBLite consensus disorder prediction 492 506 - -
Vivi2g01099 713 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 696 IPR045042 -
Vivi2g01099 713 MobiDBLite consensus disorder prediction 628 643 - -
Vivi2g01099 713 SUPERFAMILY Sm-like ribonucleoproteins 284 354 IPR010920 -
Vivi2g01099 713 MobiDBLite consensus disorder prediction 681 697 - -
Vivi2g01099 713 MobiDBLite consensus disorder prediction 628 658 - -
Vivi2g01099 713 MobiDBLite consensus disorder prediction 678 713 - -
Vivi2g01099 713 Pfam Mechanosensitive ion channel 241 448 IPR006685 GO:0016020|GO:0055085
Vivi2g01099 713 Gene3D - 194 298 - -
Vivi2g01099 713 MobiDBLite consensus disorder prediction 491 511 - -
Vivi2g01099 713 Gene3D - 300 355 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01099 Vivi-Chr2 44586575 44600012 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01099 9 703 Mechanosensitive Ion Channel Family AT5G10490 54.326 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01099 K22047 - gmx:100789444 1059.67