Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01072 ATGCCGGATGTTCATATCCTTGTTAATGATTTTGTGAATCAGCTTAAAAAACGTAAAATTGAAGGTTCTCAGGCCACGGCAAAGCAGACAGCAGAGTTGCTTCGGTCTGTGATTTCACAACAGAGGTTGCCTCAAACAAATCAGGCCACAGCTCTGATTAATGCAGTAAGGGTTGTGGGGGAGAAGCTTATCGCTGCTAATCCTGTTGAGCTTGCTGTGGGAAATATTGCGAGGCGAGTTTTGCATATTATAAGGGAGGAGGATCTTTCCCTTGCCACAGCTGCTATAGCTGGTTTGGAACTATCAGCTGTAAGTGACGATGAAGATGACGTGGATCGAGATGATTATCCTGTTTTATCTGCTGCTGCGGTTGCAGCTGCTGCAAGAAGCACCTTGCGTCCACCATCATTGCAAACTCTTCTAGAGGATACGCCTATTACAGCAGCCATTCCACACACATCTTCTTCAGGGGGTGATTCTGAAGGGAAAAGTAGATCTATTGATAAGAGTTCAAGAGGTCGGAAGTTGAAGCATGATGTCATTGAAGCAGTTAATGAACTTATTCAAGACATATCTACTTGCTATGAACAAATAGCTGAACAAGCAGTAGAGCACATTCATCAAAATGAGGTAATTTTAACGCTAGGAAGTTCAAAGACAGTGTTGGAATTTCTTTGTGCTGCAAAGGAGAAAAAGAGATCATTTAAGGTCTTCGTTGCCGAAGGTGCCCCAAGATATCAGGGACATCTCCTTGCAAAAGAATTGGCTGCTAGAGGCTTACAGACCACAGTGATTACTGATTCTGCAGTTTTCGCCATGATTTCCCGAGTGAACATGGTTATTGTTGGAGCTCATGCTGTCATGGCTAATGGTGGAGTCATTGCCCCAGTTGGATTAAATATGGTTGCACTTGCAGCTCAAAGGCATGCTGTTCCTTTTGTTGTACTTGCTGGAAGTCACAAGTTGTGCCCTTTGTATCCACACAATCCTGAAGTCCTATTAAATGAGCTGAGATCCCCGTCTGAGCTACTTGACTTTGGGGAGTTCTCGGATTGCATGGATTCTGCAAGTGGTGGAGGTTCTCTTCATGTGGTAAACCCAACATTCGATTATGTGCCACCAAAACTTGTTAGTCTCTTTATTACTGACACAGGAGGGCATAACCCATCATACATGTACCGGCTCATTGCTGATTACTATTCAGCTGATGATTTGGTTGTGAAACGAAGACCTGCTACTGGGATTTGA 1248 0.4383 MPDVHILVNDFVNQLKKRKIEGSQATAKQTAELLRSVISQQRLPQTNQATALINAVRVVGEKLIAANPVELAVGNIARRVLHIIREEDLSLATAAIAGLELSAVSDDEDDVDRDDYPVLSAAAVAAAARSTLRPPSLQTLLEDTPITAAIPHTSSSGGDSEGKSRSIDKSSRGRKLKHDVIEAVNELIQDISTCYEQIAEQAVEHIHQNEVILTLGSSKTVLEFLCAAKEKKRSFKVFVAEGAPRYQGHLLAKELAARGLQTTVITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDSASGGGSLHVVNPTFDYVPPKLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKRRPATGI 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01072 415 FunFam translation initiation factor eIF-2B subunit beta 194 400 - -
Vivi2g01072 415 Gene3D - 194 399 IPR042529 -
Vivi2g01072 415 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 404 IPR037171 -
Vivi2g01072 415 Pfam Initiation factor 2 subunit family 19 389 IPR000649 GO:0044237
Vivi2g01072 415 MobiDBLite consensus disorder prediction 148 171 - -
Vivi2g01072 415 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 3 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01072 Vivi-Chr2 43119753 43127622 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01072 1 407 Eukaryotic Initiation Factors Gene Family AT3G07300 81.663 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01072 K03754 - gmx:100778545 716.457