Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01038 ATGAATGGGGCAATTCCATCTATCCACTTGTTCCTGGTGACTGAGGTGGGAAGCAAAGTAGAAAAGTTCAAAGTTGGAGACAAAGTAGGAGTGGGATTTATGGTTGATTCATGTAGATCGTGCCAAAATTGCAAAGACAATCTTGAGAGTTACTGCCCCCGATTTACAGCCACATCTAGTGCCAAGTATCATGATGGCACTGTCACATATGGAGGATACTCCGACTCAATGGTTGCTGATGAACACTTTGTGATTCGCATTCCTGATAGTTTATCTCTTGATGTTGCTGCTCCTCTCCTTTGTGCCGGCATCACAGTGTATAGTCCTCTAAGATATTTTGGACTAGACAAGCCTGGTATGAATATAGGTGTTGTTGGTCTTGGTGGACTTGGTCATATGGCTGTGAAATTTGCCAAAGCTTTCGGGGCTAATGTCACCGTAATTAGTACTTCGCCTAACAAAGAAAAGGAAGCAATAGAACACTTAGGAGCTGACACATTTCTAATAAGCCACAACCCAAATCAAATGAAGGCTGCAATGGGTAGTTTGGATGGTATTATTGACACAGTTTCAGCAGATCATCTTCTCTTACCACTGATTGGTTTATTGAAATCTCATGGAAAACTTGTAATAGTTGGTGTAGTAGTAAAGCCTCTAGAGCTTCCTGTATATGCTTTACTTGGAGGGAGAAAATTAGTAGCTGGGAGTAATATTGGAGGGATAAAGGAGACTCAAGAAATGATTGATTTTGCTGCAAAACATGATGTGAAACCTGATATTGAGGTTGTTCCGATTGATTATGTTAACACTGCAATGGAGCGTCTCGCTAAAGCAGATGTGAAATATCGATTTGTGATTGATGTTGGAAACACATTGAAACCAAGCTCTTAA 891 0.4063 MNGAIPSIHLFLVTEVGSKVEKFKVGDKVGVGFMVDSCRSCQNCKDNLESYCPRFTATSSAKYHDGTVTYGGYSDSMVADEHFVIRIPDSLSLDVAAPLLCAGITVYSPLRYFGLDKPGMNIGVVGLGGLGHMAVKFAKAFGANVTVISTSPNKEKEAIEHLGADTFLISHNPNQMKAAMGSLDGIIDTVSADHLLLPLIGLLKSHGKLVIVGVVVKPLELPVYALLGGRKLVAGSNIGGIKETQEMIDFAAKHDVKPDIEVVPIDYVNTAMERLAKADVKYRFVIDVGNTLKPSS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01038 296 Pfam Zinc-binding dehydrogenase 129 252 IPR013149 -
Vivi2g01038 296 Pfam Alcohol dehydrogenase GroES-like domain 13 86 IPR013154 -
Vivi2g01038 296 PANTHER ALDEHYDE REDUCTASE 13 291 IPR047109 GO:0016616
Vivi2g01038 296 FunFam Putative cinnamyl alcohol dehydrogenase 6 259 288 - -
Vivi2g01038 296 Gene3D - 102 258 - -
Vivi2g01038 296 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 91 257 IPR036291 -
Vivi2g01038 296 FunFam Cinnamyl alcohol dehydrogenase 102 258 - -
Vivi2g01038 296 Gene3D - 13 288 - -
Vivi2g01038 296 SUPERFAMILY GroES-like 13 119 IPR011032 -
Vivi2g01038 296 SMART PKS_ER_names_mod 3 286 IPR020843 GO:0016491
Vivi2g01038 296 CDD CAD1 13 287 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01038 Vivi-Chr2 41454553 41456308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01038 12 295 Monolignol Biosynthesis Gene Families AT4G37990 68.662 2.66e-122 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01038 K23232 - gmx:100816901 469.544