Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00999 ATGTTGCATAAACATATGAATGTTGTAACATGTTTTATTATATACTACACTTTTACTTTAAATCCAAAACTATTAGTTGCTGCTGACAACATTAGTTATGTTCCCTCAGAAAACATAGTTCTCAACTGTGGTTCTAACACATCACAACTTGTTCAATATGATGGTAGATTCTGGATTGGAGACATTCATTCACCATATTTACCTTACAATGATTTCATCAACCATTCCTTAACATCAACAGCACCTTCTTCAAACCTTCAATCTATCCCTCAAGTTCCTTATATGACTGCTAGAATTTTTCTCTCACAATTCACCTATACATTCAATGTAACTTCTGGTCCAAAATTCATACGTCTTCATTTCTACCCTTTTTCTTATTTGAATTTTAACATCTCCAAAGCTTTTTTATCAGTAACTGCTGATAACTTCACTCTTGTGCATAATTTCAGTGTTTCTCTCAATGCAGATTACTTTAACTTAGCATATTTCATGAAAGAGTTCATTGTGCATGTAAAAGGGAACAGTTTGGAACTTACTTTCGCTCCTTCATCAAATGCTTCTGATTCTTATGCATTTGTGAATGGTATTGAAATTGTTTCAATGCCAAATGGTTTATACATTAATGGTGATGATTCCCCTCTTCCTTTAGTTGGTCACTATCCAACTGTTGTTTACATTTACAATGAGACAGCTATGGAAAATTTGTATAGACTGAATGTAGGTGGCGAACAAATTCTACCGATATATGATACCGGTATGTTTCGCAATTGGGATATCGATGATGGTTACATATTTGGAGCTGATAATAGTATTAAACCATATGATGAGGACATGAAAGTTTTGTATAAAGATCATGTTCCATCATATACTGCTCCTAGTGATGTCTACCGCACATCACGTTCGATGGCTCCGTTTGAAAAAGGACTTGTCAATTTAAATTACAATCAAACATGGTTTTTTTCAGTTGATTCCGGATTCAGATATCTAATTAGGCTTCATTTCTGCGAAATTAATTACAGTATAACAAGGGTCAACGAGGTGGTTTTTTCCATGTTTTTAAATAATCAGACAGCTGAAGAAGAGTTTGATCCAGTTGGCTTAAGCGGAGGACCTGGAATTCCTATTTACAAAGACTATGTTGTTATGGTTCCTGAAGACAGTGATGCAAAGCAAGATCTTTGGCTAGATCTTCACCCTGACAAGTATTCAAAACCTTTGTACTACAGTGCTTACTTGAATGGTGTAGAGATCTTCAAACTTAGCTATGTTGATACGAGGAATCTTGCAGGCCTTAACCCTTCCGAAAAGAAATTTGGTTCATCTACAAAGGCTACACCACATGATGTTGAAAACTCAAAGAAACATACATTCATTTTCATTGGGTGCGGACTTATGGCAGTGGTAATACCAATTCTTTTGTGCTTATTTCTATTGAAGTTTAAGGTGATTAAGCCTAGTAGGTTCATGTCATGTTTTGCACTTGAACCTAATCAAATTGAAAAAGAAAAAAATCCAGCATCATTTTGCTGTCAATTTTCATTAGAAGAGATTAAAGTAGCAACAAATGACTTCAATGAGGCTCTACTTATAGGAACAGGTGGGTTTGGAAGTGTTTACAAAGGTAGTTTTGATGGCAGTGCATCTTTTGTAGCTATAAAGCGTGCAGATCTAACGTCTCAACAAGGTGTCACAGAATTTGAGACAGAGATCCATTTGCTATCGTCTGTAAGCCATAACAACATAGTCTCGCTTTTGGGATATTGCAATGAAGATGATGAGAAGATACTTGTGTATGATTTCATGCCCAATGGAACTCTTTATGACCATCTCCATTTGAATCAGAGAGATCAACATCAACCTCATTTGTCATGGATTCAAAGGCTTGAGATATGCATTGGAGTTGCAAAAGGTTTGCATTACTTACACACCGGCACAAAGCAAAAGATCATTCACCGCGATATCAAGACCACAAACATACTCTTAGACCATAATTGGGTGGCTAAAATTTCAGATTTTGGTTTGTCAAAGGAAAGTTACACTACCTTAAGCACCACTGTCGTAAAGGGTAGCACCGGTTACGTTGATCCAGAATACTATCAACGCGGAATGCTGACTGAAAAATCTGATTTATACTCACTTGGTGTGGTTTTGTTGGAAGTGTTAAGTTCAAGACAAGCTTTAAGTCCATGTGAAGAAGAAGAAGAAGATGATGAGCATTTAAACTTGGGTGAATGGGCCAAGTTTTGTTATGAGAATGGAAATGTGGAAGAAATAGTAGATCAAAATTTGGAAGGAAAGATAGTTAAGGAATGTTTAGAGTTATATTTAGGTGTTGCTATGAAATGTTTGGGTGAAAGAGGAGCGGAGAGGCCATCCAGTGGTGATGTGCTGCAGAATCTTTTAATGGCAATACAATTTCAGAAAAATGGTGGGAATGTACAAAATGTTATGCAGGAGTATTCAGATTTGACACCTGGGATTGAGTTCTCTGATATTATGATGCCTGTTGGTAGGTGA 2517 0.3627 MLHKHMNVVTCFIIYYTFTLNPKLLVAADNISYVPSENIVLNCGSNTSQLVQYDGRFWIGDIHSPYLPYNDFINHSLTSTAPSSNLQSIPQVPYMTARIFLSQFTYTFNVTSGPKFIRLHFYPFSYLNFNISKAFLSVTADNFTLVHNFSVSLNADYFNLAYFMKEFIVHVKGNSLELTFAPSSNASDSYAFVNGIEIVSMPNGLYINGDDSPLPLVGHYPTVVYIYNETAMENLYRLNVGGEQILPIYDTGMFRNWDIDDGYIFGADNSIKPYDEDMKVLYKDHVPSYTAPSDVYRTSRSMAPFEKGLVNLNYNQTWFFSVDSGFRYLIRLHFCEINYSITRVNEVVFSMFLNNQTAEEEFDPVGLSGGPGIPIYKDYVVMVPEDSDAKQDLWLDLHPDKYSKPLYYSAYLNGVEIFKLSYVDTRNLAGLNPSEKKFGSSTKATPHDVENSKKHTFIFIGCGLMAVVIPILLCLFLLKFKVIKPSRFMSCFALEPNQIEKEKNPASFCCQFSLEEIKVATNDFNEALLIGTGGFGSVYKGSFDGSASFVAIKRADLTSQQGVTEFETEIHLLSSVSHNNIVSLLGYCNEDDEKILVYDFMPNGTLYDHLHLNQRDQHQPHLSWIQRLEICIGVAKGLHYLHTGTKQKIIHRDIKTTNILLDHNWVAKISDFGLSKESYTTLSTTVVKGSTGYVDPEYYQRGMLTEKSDLYSLGVVLLEVLSSRQALSPCEEEEEDDEHLNLGEWAKFCYENGNVEEIVDQNLEGKIVKECLELYLGVAMKCLGERGAERPSSGDVLQNLLMAIQFQKNGGNVQNVMQEYSDLTPGIEFSDIMMPVGR 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00999 838 FunFam FERONIA receptor-like kinase 230 421 - -
Vivi2g00999 838 SMART serkin_6 524 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00999 838 Gene3D Transferase(Phosphotransferase) domain 1 601 821 - -
Vivi2g00999 838 Gene3D Phosphorylase Kinase; domain 1 490 600 - -
Vivi2g00999 838 SUPERFAMILY Protein kinase-like (PK-like) 507 798 IPR011009 -
Vivi2g00999 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
Vivi2g00999 838 PANTHER OS03G0124300 PROTEIN-RELATED 17 476 IPR046957 GO:0004672
Vivi2g00999 838 FunFam FERONIA receptor-like kinase 38 202 - -
Vivi2g00999 838 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 601 807 - -
Vivi2g00999 838 CDD STKc_IRAK 530 800 - -
Vivi2g00999 838 Pfam Malectin-like domain 54 419 IPR024788 -
Vivi2g00999 838 ProSiteProfiles Protein kinase domain profile. 524 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00999 838 Pfam Protein kinase domain 528 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00999 838 ProSitePatterns Protein kinases ATP-binding region signature. 530 553 IPR017441 GO:0005524
Vivi2g00999 838 FunFam receptor-like protein kinase FERONIA 492 600 - -
Vivi2g00999 838 Gene3D - 230 420 - -
Vivi2g00999 838 Gene3D - 38 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00999 Vivi-Chr2 38785376 38789478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00999 24 810 Receptor kinase-like Gene Family AT3G51550 47.863 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi2g00999 Malectin_like 2.8e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00999 - - tpra:123911549 1369.76