Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g00984 | ATGGAGCAACAAGGACATCAAAGACATAGAATCATAAATGGTTCACATGTTTACTATGGAGATGTAATTGGACCATTTGTACCATGGAATGTTATTAGCAATGTTAACTATCAAATGATGAGTGTTCCTTATGGGTCTCATGGTGGAAATCAACTTAGGAGGAGTATCCCACAAATATATGCTCATGTTGAAGATGGACACTTTATTCTCAATGATCAAGTCAACCATGTTTCAACAAGAAGATTCATTGAACCTCATACACCATATCATACCAATCTTGGAAGAAACCAACCTAGGGTGAGTACACAAGATGTCTTGCCGGCTAATGCTTATGTTCAAGATGGTCACTTGATTCTTCAACAAAACAACATAAACCAAGCTTTATTAAGAAGAGACATTAAAGCTACTCAAACACGTTCTGTTACAAATCTTAAGAGAATTACAATTGAAGATGGAACGACAAATTCTGAACATATCACATGTTCCATTTGTCTTATGGAACTTTCAAGTAGTTCAATCGCTATTCAATTGCCTAGTCCTTGCTCACATGTGTATCACGAAGATTGTATTATGAGGTGGTTTGATAGATCTAGGACATGCCCTTTGTGTCGTAGGTCTGTTTTGTGA | 627 | 0.3652 | MEQQGHQRHRIINGSHVYYGDVIGPFVPWNVISNVNYQMMSVPYGSHGGNQLRRSIPQIYAHVEDGHFILNDQVNHVSTRRFIEPHTPYHTNLGRNQPRVSTQDVLPANAYVQDGHLILQQNNINQALLRRDIKATQTRSVTNLKRITIEDGTTNSEHITCSICLMELSSSSIAIQLPSPCSHVYHEDCIMRWFDRSRTCPLCRRSVL | 208 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g00984 | 208 | SUPERFAMILY | RING/U-box | 160 | 207 | - | - | |
Vivi2g00984 | 208 | ProSiteProfiles | Zinc finger RING-type profile. | 161 | 204 | IPR001841 | - | |
Vivi2g00984 | 208 | SMART | ringv_2 | 160 | 204 | IPR011016 | GO:0008270 | |
Vivi2g00984 | 208 | SMART | ring_2 | 161 | 203 | IPR001841 | - | |
Vivi2g00984 | 208 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 121 | 208 | IPR013083 | - | |
Vivi2g00984 | 208 | Pfam | Ring finger domain | 160 | 204 | IPR001841 | - | |
Vivi2g00984 | 208 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 122 | 205 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g00984 | Vivi-Chr2 | 36609611 | 36610237 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g00984 | 150 | 204 | C3H Transcription Factor Family | AT5G54990 | 47.273 | 4.70e-11 | 58.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g00984 | - | - | vvo:131648854 | 436.417 |