Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00909 ATGGTTCCTAGTGATATTAATGGACTCAATTATATAGTTCCTCCTGAGAATTCATTCCAAATTCCTCAAAACTATGTTTTCCCACAAAGTGAAATACCAAATTTTCATCTAAATAATCTCTTAAGCACTTTACCAAACTGCCATTACCCCTCAGCAGGGCATGAATTTGCACCTCCTTCATGTCTAAGCAGCAACTCAACTACTTCCGATGAAGCCGATGAGCTTCAGTTCAACAACGTGATCGACGAAAGGAAGCACCGGCGAATGATATCCAACAGAGAATCAGCAAGGAGATCAAGGATGAGGAAACAAAAACACTTGGATGAACTCTGGTCACAAGTGGTAAGACTCAGGACTGAGAATAATAATCTTGTTGACAAACTCAATCATGTTTCTGAGTCACATGACAGAGTTGTTCAAGAGAATGCACGCCTTAAGGAAGAAACTTTCGATCTTCGCCAAATGGTAGCTGATATGCAAATTGGTAACTCTTTTCCTTGCAATATGGAAGATTTTTCTGAAATTCCATGCACCACCACTTCACAACTCAATGATGACTCCTCAAAACCAATCAATTCCACATGA 585 0.3966 MVPSDINGLNYIVPPENSFQIPQNYVFPQSEIPNFHLNNLLSTLPNCHYPSAGHEFAPPSCLSSNSTTSDEADELQFNNVIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENNNLVDKLNHVSESHDRVVQENARLKEETFDLRQMVADMQIGNSFPCNMEDFSEIPCTTTSQLNDDSSKPINST 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00909 194 Pfam bZIP transcription factor 84 133 IPR004827 GO:0003700|GO:0006355
Vivi2g00909 194 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Vivi2g00909 194 Gene3D - 82 139 - -
Vivi2g00909 194 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Vivi2g00909 194 Coils Coil 128 148 - -
Vivi2g00909 194 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 9 168 IPR044521 -
Vivi2g00909 194 FunFam BZIP transcription factor 82 133 - -
Vivi2g00909 194 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
Vivi2g00909 194 SUPERFAMILY Leucine zipper domain 84 134 IPR046347 GO:0003700|GO:0006355
Vivi2g00909 194 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00909 Vivi-Chr2 30900426 30901420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00909 46 175 bZIP Transcription Factor Family AT3G30530 60.584 3.73e-50 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi2g00909 bZIP_1 1.7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00909 - - gmx:100778078 273.478