Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00892 ATGATGCTAGTCGAATTGTTGATGGAAACTTCGATGAATTTACAAGATTTGAAGGAAGGAAAGACTGTCCAGGTTCCGATATATGATTTCAAGTCCAGTTCACGCGTAGGATACAGGACTGTAGAACCCCCGACTTCCAATATTGTGATTATAGAAGGTATCTATGCCTTGAGTGAGAAGTTGCGAACTTTGCTGGACCTTCGAGTTTCTGTTACAGGTGGAGTTCACCTTGACCTTGTAAAGCGAGTTATACGTGACATTCAACGTGCTGGCCAAGAGCCTGAAGAAATTATTCATCAAATATCTGAGACGGTATATCCTATGTACAAGGCTTTCATTGAGCCAGATCTCAAGACGGCGCATATAAAAATCACCAACAAATTTAATCCATTTACTGGATTCCAGAGCCCGACTTACATATTAAAGTCAGCAAAGACTGTAGCAGTTGACCAAATTAAAGCTGTTCTCTCTGAAGATTGTCTGGAAACAACTGAGCAAACTTATGATATATATCTTCTACCTCCTGGTGAAGATCCAGAAACATGCCAATCGTATTTAAGGATGCGAAACAAGGATGGGAAATACAGTCTTATGTTTGAGGAATGGGTGACAGACAATCCCTTTGTCATATCGCCGAGAATTACTTTTGAGGTCAGTGTGCGCCTCCTTGGTGGACTAATGGCCTTGGGATACACGATAGCTACTATCCTTAAGAGAAACAGCCATGTCTTTTCTGATGATAAGGTTTGTGTGAAACTAGATTGGCTTGAGCAACTTAATCGACATTATGTTCAGGTACAAGGGAGAGATCGCTTAGTTTTGAAAGAGATTGGAGATCAGCTGGGTCTCGAAGGTTCCTACATTCCTCGTACATACATTGAGCAAATTCAACTTGAAAGGCTTGTGAATGAGGTTATGGCTCTACCAGAAGATTTGAAGACAAAGCTCAGCCTGGATGAGGATTTGGTTTCAAGCCCCAAAGAAGCACTTTCTAGAGCTTCTGCTGACAGGGTTGCCATGAGAAATGAGAATATGAGAAGTGGATTGTCACAGTCATATACAAGTCAAAGGGACAAAAATGCAGCCAAAGTTAATGGATATTTTACCAACAATCGAGGATTTGGTGAAAGAAATTCAGATTCCTCCACAACACAATTAAATCAGAGAGCCATTAGTCAGCTTTCAGAACAGATTTCCGCCCTCAATGATAGAATGGATGAATTTACAAATCGGATTGAAGAGCTGAATAGCAAGCTGACCATTAGAAATAAGTCTCCAAGCCAACCAAATATGTTAGCTCAAGCCGAAGTCTGCAATGGTTCTGCTCCCACGTCTTACTTCATCAACAGTTTGGGCAATGGTAGCATAACTGGTTATAAGATGCCACATTCCTCGTCTACATCCCAATTAAATAAGGAGTCTCCCTTAATAGATGAGATATCGGGCATTACACGTGGGCAGCGTCAGATCATGCATCAAATGGACAATCTAAATAATCTTCTTCGGGGTGGTATAGGGGAAAGGTCTCAGCAAACAAGAATCAACAACAAGAGCATAGTTACAGATTTGAATTACATTGGAGCGAGTATTGTAGTGGTAGTTGCAGTTGGTTGTTTGGGGATCTTTTTGACCCGAAAGTGA 1641 0.4113 MMLVELLMETSMNLQDLKEGKTVQVPIYDFKSSSRVGYRTVEPPTSNIVIIEGIYALSEKLRTLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLKTAHIKITNKFNPFTGFQSPTYILKSAKTVAVDQIKAVLSEDCLETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDKVCVKLDWLEQLNRHYVQVQGRDRLVLKEIGDQLGLEGSYIPRTYIEQIQLERLVNEVMALPEDLKTKLSLDEDLVSSPKEALSRASADRVAMRNENMRSGLSQSYTSQRDKNAAKVNGYFTNNRGFGERNSDSSTTQLNQRAISQLSEQISALNDRMDEFTNRIEELNSKLTIRNKSPSQPNMLAQAEVCNGSAPTSYFINSLGNGSITGYKMPHSSSTSQLNKESPLIDEISGITRGQRQIMHQMDNLNNLLRGGIGERSQQTRINNKSIVTDLNYIGASIVVVVAVGCLGIFLTRK 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00892 546 Pfam CYTH domain 140 292 IPR023577 -
Vivi2g00892 546 Pfam Phosphoribulokinase / Uridine kinase family 13 124 IPR006083 GO:0005524|GO:0016301
Vivi2g00892 546 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 126 IPR027417 -
Vivi2g00892 546 CDD UMPK_like 13 127 - -
Vivi2g00892 546 ProSiteProfiles CYTH domain profile. 136 298 IPR023577 -
Vivi2g00892 546 PANTHER URIDINE KINASE 11 311 - -
Vivi2g00892 546 Coils Coil 391 418 - -
Vivi2g00892 546 Gene3D - 4 136 IPR027417 -
Vivi2g00892 546 Gene3D - 142 300 - -
Vivi2g00892 546 SUPERFAMILY CYTH-like phosphatases 151 295 IPR033469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00892 Vivi-Chr2 29694696 29700478 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00892 14 124 PRT Gene Family AT4G26510 30.357 9.27e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00892 K00876 - gmx:100781286 872.463