Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00826 ATGAGGAGGAAGTTACATCTAAGCAAGATCTATTCCTTCGCATGTGGGAGACCGTCTTTTAAAAGAGAGCATTCACATATCGGAGAGCGCGGATATTCACGACATGTCTCGTGCAATCAACCGCACACTTCTTTTGAGTACGCAGATAATTCAGTGAGCTCTACAAAGTATACTCTCGCTACATTTTTGCCCAAGTCACTCTTTGAACAGTTTAGGAGAGTCGCTAATTTCTATTTTTTGGTTACCGGTACTTTGGCCTTCACAAAAATTGCTCCCTATACAGCTGCTAGCGCCATTCTTCCTTTGCTTATTGTTATTGGCGCTACTATGGTTAAAGAGGGTATCGAAGATTGGAGACGCAAAAAACAGGATATTGAGGTCAATAATAGAAGAGTTAAAGTGCATAACGGGGATGGAACTTTTGAATATACTGAGTGGAAGAATCTGAAGGTGGGGCATATAGTTAAGATAATAAAAGATGAATTCTTTCCTGCAGACCTACTACTTGTTTCATCAAGTTACGAGGACGCGGTTTGTTATGTCGAGACAATGAATTTGGATGGAGAGACTAATTTGAAGTTAAAACAAGGATTGGAACTCACTTCTTTTTTACAACAAGACTTTCACTTCTCTGATTTTAGAGCTTCCGTCAAATGTGAAGATCCAAATGCTAATTTATATTCATTTGTTGGGACTATGGACTTTAATCATCAACAATATCCTCTATCTTCTCACCAACTTCTTCTTAGAGACTCTAAACTTCGTAATACTGACTACATCTTTGGCGTCGTGGTCTTTACTGGTCACGATACTAAGGTTATTCAAAACTCCACCCATCCGCCTTCGAAAAGAAGCAGAGTTGAGAAGAAGATGGATAAGATTATCTACTTATTGTTTTGCATTTTGTTTTTTATGGCGGCTCTTGGATCTGTTTTCTTTGGAATTACTACGGAAGATGATTTGAACCAACAAGGTGTCATGAAAAGATGGTATCTAAGACCAGACCATTCTACAATTTTCTTTGATCCTAAAAGACCTTCTGCTGCGGCTATGTTTCATTTTTTGACAGCCTTGATGTTATACAGTTTCTTCATTCCAATCTCATTGTATGTATCAATAGAAATTGTCAAAGTTCTTCAAAGCATCTTCATCAATCAAGATAAACATATGTACTACGCCGAAGCAGATAAACATGCCTATGCCCGTACTTCAAACTTGAATGAGGAACTTGGACAAGTTGATACAATACTTTCTGATAAAACAGGAACTCTCACTTGCAACTCAATGGAGTTTATAAAATGTTCCATTGCTGGGGTAGCTTACGGCCGTGGTGTTACAGAAGTCGAGAGGGCCATGAATAGAAGAAATAATTCTCCTTTGATTAATCACATCACGGATTCTCCCATTACAAATCAACCCGTACCCATCAAAGGTTTTAACTTCACGGATGAAAGGATAACCAATGGAGCCTGGGTTAATGAGCCTAATGCAGATATTATCCACAAGTTTTTTCGCTTGTTGGCAATCTGTCATACAGCCATACCAGAAGTGGATGATGATGCAGGAAATGTCTCGTATGAGGCCGAATCTCCTGACGAAGCAGCATTTGTGGTTGCAGCCAGAGAGATTGGTTTTGAATTCTATAAAAGGACTCAAACTACTTTATCCATCTATGAATTGGATCCTGTTTCTGGTGACAAAGTCGAAAGAGTTTTCACACTTCTGAATGTGTTAGAATTCAATAGCACAAGGAAGCGAATGTCAGTGATAGTGAAAGATGAAGAAGGGAAAATTCTTCTGCTGTGTAAAGGAGCAGACAGTGTCATGTTCGAAAGACTTGCCAAGGATGGTAGGGAATATGAAGAGAAAACCTTGGAAGATGTGCATGATTATGCTGATGCAGGTCTAAGGACCCTGATATTGGCTTACCGTGAACTTGACGAAGAGAAATACAAGGAGTTTGATAAAGAATTTTCTCAAGCAAAAATTTCAGTTAGTGCAGATCGGGAAACATTGATAGGTGAGATAACAGATATGATTGAGAGTGATCTGATCCTTCTTGGTGCAACTGCGGTAGAGGACAAGCTCCAAAATGGGGTTCCTGATTGCATTGACAAACTTGCACAAGCTGGAATTAAGATATGGGTTCTAACTGGCGATAAAATGGAGACTGCCATCAATATTGGTTTTGCTTGTAGTTTTCTTAGACAAGGAATGAAGCAGCTTATAATTCAGTTGGAGAGTCCAGACATTCAAGCATTGGAGAAGGCTGGAGACAAGAGGGCCATAGCAAAAGCTTCGAGGGAAAGTATCCGGCATCAGATATCTGATGGTGCTCAACAGCTTGCCGCCTCTAGAGGAACCTTTGAGCAAGCATTTGCACTAATTATTGATGGAAAATCACTTGCCTACGCTTTAGAGGATAATACCAAGGACATGTTTCTAGATCTTGCAGTCCGCTGTGCATCTGTTATCTGCTGCCGGTCATCGCCAAAGCAGAAAGCACTAGTTACTAGACTAGTAAAATATGGAACTGGTAAAACTACATTAGCTATTGGTGATGGAGCTAATGATGTTGGAATGCTTCAAGAAGCTGATATAGGGGTTGGAATCAGCGGAGTTGAAGGAATGCAGGCTGTTATGTCTAGTGATATTGCAATCGCACAGTTCCGTTATTTGGAAAGATTACTTCTTGTACACGGACATTGGTGTTACAGGAGGATCTCATCAATGATATGCTATTTTTTCTACAAGAACATCACATTTGGCTTTACTCTATTCTTGTATGAAGCATGTACATCATTCTCTGGACAGCCTGCATACAATGACTGGTTTTTGTCTCTCTATAATGTCTTCTTTTCATCACTTCCAGTGGTTGCCCTGGGAGTCTTTGACCAGGATGTATCTGCTCGGTACTGTCTAAGATTTCCTATATTGTATCAAGAAGGTGTGCAAAATGTCCTGTTTAACTGGATGAGGATCCTAAGTTGGATGCTAAATGGATTTATGAGTGCGATAATAATATTCTTCTTCTGCACAAACGCGATGGAGATTCACGCCTTTGATAAGGAAGGAAGAACTGCGGGGAGGGATATACTCGGAGCAACTATGTATACATGTGTGGTTTGGGTTGTCAACTTGCAGATGGCACTTGCCATAAGTTACTTCACACTGATTCAACATGTTTTCATTTGGGGAACCATTGCTCTATGGTACCTTTTTCTATTGGCTTACGGTGCACTACCTCCTGGAATTTCCACAATTTCTCATAAACTCTTCGTTGAAACTCTTGCACCATCTCCCTCTTATTGGATTGTGACATTGTTTGTGGCGATCACAACACTCATACCATATTTAACTTACTCAGCAATCAAGATCCAGTTCTTCCCTTTTTATCATGAGATAGTACAATGGATAAGGTATGAGGGGAAGTCAAATGATCCCGAATTCTGTCATATGGTGCGCCAGAGATCCTTGCGCCCAACCACGGTCGGTTCAACAGCACGCTTAGCAGCTAAGACTAACAGCATCAGAGAGAGTTTTACAAGATGA 3552 0.4026 MRRKLHLSKIYSFACGRPSFKREHSHIGERGYSRHVSCNQPHTSFEYADNSVSSTKYTLATFLPKSLFEQFRRVANFYFLVTGTLAFTKIAPYTAASAILPLLIVIGATMVKEGIEDWRRKKQDIEVNNRRVKVHNGDGTFEYTEWKNLKVGHIVKIIKDEFFPADLLLVSSSYEDAVCYVETMNLDGETNLKLKQGLELTSFLQQDFHFSDFRASVKCEDPNANLYSFVGTMDFNHQQYPLSSHQLLLRDSKLRNTDYIFGVVVFTGHDTKVIQNSTHPPSKRSRVEKKMDKIIYLLFCILFFMAALGSVFFGITTEDDLNQQGVMKRWYLRPDHSTIFFDPKRPSAAAMFHFLTALMLYSFFIPISLYVSIEIVKVLQSIFINQDKHMYYAEADKHAYARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERAMNRRNNSPLINHITDSPITNQPVPIKGFNFTDERITNGAWVNEPNADIIHKFFRLLAICHTAIPEVDDDAGNVSYEAESPDEAAFVVAAREIGFEFYKRTQTTLSIYELDPVSGDKVERVFTLLNVLEFNSTRKRMSVIVKDEEGKILLLCKGADSVMFERLAKDGREYEEKTLEDVHDYADAGLRTLILAYRELDEEKYKEFDKEFSQAKISVSADRETLIGEITDMIESDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSFLRQGMKQLIIQLESPDIQALEKAGDKRAIAKASRESIRHQISDGAQQLAASRGTFEQAFALIIDGKSLAYALEDNTKDMFLDLAVRCASVICCRSSPKQKALVTRLVKYGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEACTSFSGQPAYNDWFLSLYNVFFSSLPVVALGVFDQDVSARYCLRFPILYQEGVQNVLFNWMRILSWMLNGFMSAIIIFFFCTNAMEIHAFDKEGRTAGRDILGATMYTCVVWVVNLQMALAISYFTLIQHVFIWGTIALWYLFLLAYGALPPGISTISHKLFVETLAPSPSYWIVTLFVAITTLIPYLTYSAIKIQFFPFYHEIVQWIRYEGKSNDPEFCHMVRQRSLRPTTVGSTARLAAKTNSIRESFTR 1183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00826 1183 Pfam Cation transport ATPase (P-type) 523 613 - -
Vivi2g00826 1183 Gene3D - 532 661 IPR023299 GO:0000166
Vivi2g00826 1183 Gene3D - 683 892 IPR023214 -
Vivi2g00826 1183 Gene3D - 108 278 - -
Vivi2g00826 1183 SFLD p-type atpase 399 903 IPR044492 -
Vivi2g00826 1183 SUPERFAMILY Calcium ATPase, transmembrane domain M 47 1130 IPR023298 -
Vivi2g00826 1183 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 33 1141 - -
Vivi2g00826 1183 FunFam Phospholipid-transporting ATPase 529 687 - -
Vivi2g00826 1183 SUPERFAMILY HAD-like 412 907 IPR036412 -
Vivi2g00826 1183 FunFam Phospholipid-transporting ATPase 687 892 - -
Vivi2g00826 1183 NCBIfam HAD-IC family P-type ATPase 824 933 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi2g00826 1183 NCBIfam HAD-IC family P-type ATPase 351 438 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi2g00826 1183 NCBIfam phospholipid-translocating P-type ATPase 47 1137 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vivi2g00826 1183 PRINTS P-type cation-transporting ATPase superfamily signature 417 431 - -
Vivi2g00826 1183 PRINTS P-type cation-transporting ATPase superfamily signature 852 871 - -
Vivi2g00826 1183 FunFam Phospholipid-transporting ATPase 108 278 - -
Vivi2g00826 1183 SUPERFAMILY Calcium ATPase, transduction domain A 132 275 IPR008250 -
Vivi2g00826 1183 Pfam Phospholipid-translocating P-type ATPase C-terminal 880 1130 IPR032630 -
Vivi2g00826 1183 Pfam Phospholipid-translocating ATPase N-terminal 37 97 IPR032631 -
Vivi2g00826 1183 SFLD Haloacid Dehalogenase 399 903 - -
Vivi2g00826 1183 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 486 689 IPR023299 GO:0000166
Vivi2g00826 1183 CDD P-type_ATPase_APLT_Dnf-like 49 1012 - -
Vivi2g00826 1183 ProSitePatterns E1-E2 ATPases phosphorylation site. 419 425 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00826 Vivi-Chr2 25510042 25514706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00826 5 1180 Primary Pumps ATPases AT1G68710 72.323 0.0 1836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00826 K01530 - gmx:100811892 1977.6