Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00805 ATGAAAATCCTAAGTTGGAACTGCAAGGGGTTGAGGAGTCCTCGTGCACTTCGAGCCTTGCAAAGGCATATTCGAAATGAAAATCCCACCCTTTTCTTTCTGATGGAGACACACCTGAAGGATGGGGAGCTGCAGGTAATTAAGTATAAAATTGATTTTGAGCATGTTTTCTCTCTTGAGTGTGTTGAGTATGGAAGAGAAAGGGTGGGTGGTCTAGCAATTTTGTGTTTATGTTTTTTCTCTCTAGCAAGTTTTGAAGAGAGATTTCAGAAGGAATCTTTGCTAAGTTCATCTGCTGTTCGACCGACCTTGGTTAAGATATTGCTCCAGTTATTGAGGGTGCTGTTAACCACATTGCCTCGAGAAGATTTGAGTTTGGAGCTATACCCATGTTGTGCTGAAGATGACTTTGCTTATCTGAAGACCAAAGATCATTGTCCTGTGGAGACACATACCCTTCCTGATGGACAGGTGATAACAATTGGAAGAGAAAGATATACAGTTGGTGAAGCTTTATTCCAGCCAAGTCTATTGGGTTTAGAGGCTCATGGCATTGTAGAGCAGCTTGTCCGTACTATTTCAACAGTGACATATGATAATCATCGGCAACTTCTGGAAAATACTGTGGTTTGTGGTGGCACTTCTTCTATGACTGGTTAA 660 0.4167 MKILSWNCKGLRSPRALRALQRHIRNENPTLFFLMETHLKDGELQVIKYKIDFEHVFSLECVEYGRERVGGLAILCLCFFSLASFEERFQKESLLSSSAVRPTLVKILLQLLRVLLTTLPREDLSLELYPCCAEDDFAYLKTKDHCPVETHTLPDGQVITIGRERYTVGEALFQPSLLGLEAHGIVEQLVRTISTVTYDNHRQLLENTVVCGGTSSMTG 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00805 219 SUPERFAMILY DNase I-like 1 74 IPR036691 -
Vivi2g00805 219 Pfam Actin 140 219 IPR004000 -
Vivi2g00805 219 SUPERFAMILY Actin-like ATPase domain 131 219 IPR043129 -
Vivi2g00805 219 PANTHER ACTIN 122 219 IPR004000 -
Vivi2g00805 219 Gene3D Endonuclease/exonuclease/phosphatase 1 119 IPR036691 -
Vivi2g00805 219 Gene3D - 183 219 - -
Vivi2g00805 219 Gene3D Actin; Chain A, domain 4 141 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00805 Vivi-Chr2 25165954 25170665 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00805 104 219 Cytoskeleton Gene Families AT3G18780 37.500 3.09e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00805 K16615 - vvo:131636752 248.054