Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00785 ATGAGTCGAGCTAATGCAGCTGGTGCCAAGGGAAAGAAGAAAGGTGCCACCTTCACCATTGACTGTGCTAATCCAGTTGAAGACAAGATCATGGACATTGCCTCCCTTGAGAAGTTTCTTCAAGAGAGGATCAAGGTCGGTGGCAAAGCCGGCGCACTTGGTGATTCTGTCACCGTTACCAGGGAGAAATCCAAGATCACTGTTACCTCTGACAGCAATTTCTCCAAAAGGTATTTGAAGTACCTGACAAAGAAGTATTTGAAAAAGCATTATGTCAATAGCTTGAATTTGAATATAAACTGA 303 0.4323 MSRANAAGAKGKKKGATFTIDCANPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHYVNSLNLNIN 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00785 100 Pfam Ribosomal L22e protein family 14 92 IPR002671 GO:0003735|GO:0005840|GO:0006412
Vivi2g00785 100 Gene3D - 5 97 IPR038526 -
Vivi2g00785 100 PANTHER 60S RIBOSOMAL PROTEIN L22 1 93 IPR002671 GO:0003735|GO:0005840|GO:0006412
Vivi2g00785 100 FunFam 60S ribosomal protein L22-2 5 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00785 Vivi-Chr2 24369932 24371079 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00785 1 92 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 84.783 9.16e-42 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00785 K02891 - csav:115723248 149.828