Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00782 ATGCAAACCTTCAAACCTGCTCAATCCAACTCTCAACTCTATTGCCACCAGTCCTTCTTGCTTCGCGGAGACGATATTAATAGAAACCAAATGCGCTTTTCTGATCTCGGAGATTTTCACCATTCTTCTCCTTTCTTTCAACAGCAGGATGCTCTTGATTTAACTTCATCTTGTATGTTTAACAATGTAAAGTCCAACAATCTTGTTATTGGTGCCACTAACATGCACTATGGATCAACAATCAACACGACGGTTGGTTCAGCGGAGATAGCTTCAAATGGCGCAAGGTGTTCGGATGCAGGGCAGCAGCAGCACCAACTGATGTACAACAAGGGAATAGCTTCCTTGCCTTTGGGGAACAATCATGTTGAAAATTGGGCTGATTCTGGAATAGCTGATAATAGCCAACAGACTGATGATAATTCTACTGATATTGATATTGATACTGATGATAGACATCAATCCAATAGAGGAAATGCTCACTCCAAGGATCAGACAAAGTTCAGAGCTGAAGATCACAAGACCCTTCGTAGACTTGCTCAGAATCGCGAGGCGGCAAGGAAGAGCCGGTTACGGAAGAAGGCTTATGTACAGCAGCTGGAGAGCAGCCGAGTCAAGCTTGTGCAATTAGAGCAAGAGCTTCAACGAGCACGTCAACAGGGCATCTTTATTGCAAATCCTGGAGATCAAGGTCATTCAACTGTTGGAAATGGTGCCTTAGCATTTGACTTGGAATATGCGCACTGGGTTGACGAGCACCAACGTCTGCTCAACGATCTAAGATCCGCGTTAAATTCTCAAATGGGTGATAATGAATTGCATCTTCTTGTTGATGGTGTTATGGCACATTACAACGAATTATTCAGGTTAAAGAAAATAGGGGCAAAGGCAGATATATTTCACATGCTTTATGGGCTGTGGAAGACACCGGTAGAAAGATTTTTTATTTGGCACGGTGCATTCCGTTCATCAGAACTTCTCAAGATAGTCAAGAACCATCTGGAGCCATTAACCGAAAATCAGATGATGGGAATTTGTAATCTGCAGCAGTCTACACAGCAGGCTGAGGATGCATTATCACAAGGAATGGAAGTATTGAAACAATCTCTTTCAGAAATACTTTCGTCTACCTCTTCGGTACCTAGTACTGGTTCGGGAAATGTGTCTGATTACATGGACCAGATGGCATTTGCAATGAGCAAGCTTGCATCACTAGAGGAATTCCTTCAAAAGGCTGACCTTTTGAAGCAAGAATCTCTACAACAGTTGCAAAGAATTTTGACTACGCGTCAGATCGCCAGGGCACTCCTTGTCCGAAATGATTACATTTCAAGACTAAGAGCACTTAGTTCTTTATGGCTAGCTCGCCCAAGGGAGTAA 1380 0.4304 MQTFKPAQSNSQLYCHQSFLLRGDDINRNQMRFSDLGDFHHSSPFFQQQDALDLTSSCMFNNVKSNNLVIGATNMHYGSTINTTVGSAEIASNGARCSDAGQQQHQLMYNKGIASLPLGNNHVENWADSGIADNSQQTDDNSTDIDIDTDDRHQSNRGNAHSKDQTKFRAEDHKTLRRLAQNREAARKSRLRKKAYVQQLESSRVKLVQLEQELQRARQQGIFIANPGDQGHSTVGNGALAFDLEYAHWVDEHQRLLNDLRSALNSQMGDNELHLLVDGVMAHYNELFRLKKIGAKADIFHMLYGLWKTPVERFFIWHGAFRSSELLKIVKNHLEPLTENQMMGICNLQQSTQQAEDALSQGMEVLKQSLSEILSSTSSVPSTGSGNVSDYMDQMAFAMSKLASLEEFLQKADLLKQESLQQLQRILTTRQIARALLVRNDYISRLRALSSLWLARPRE 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00782 459 Coils Coil 193 220 - -
Vivi2g00782 459 MobiDBLite consensus disorder prediction 130 171 - -
Vivi2g00782 459 Pfam Seed dormancy control 257 331 IPR025422 GO:0006351|GO:0043565
Vivi2g00782 459 PANTHER TRANSCRIPTION FACTOR TGA9 113 459 - -
Vivi2g00782 459 Pfam bZIP transcription factor 173 212 IPR004827 GO:0003700|GO:0006355
Vivi2g00782 459 MobiDBLite consensus disorder prediction 146 171 - -
Vivi2g00782 459 ProSiteProfiles DOG1 domain profile. 239 456 IPR025422 GO:0006351|GO:0043565
Vivi2g00782 459 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 172 216 IPR004827 GO:0003700|GO:0006355
Vivi2g00782 459 FunFam BZIP family transcription factor 173 222 - -
Vivi2g00782 459 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 177 192 IPR004827 GO:0003700|GO:0006355
Vivi2g00782 459 Gene3D - 173 222 - -
Vivi2g00782 459 SUPERFAMILY Leucine zipper domain 174 217 IPR046347 GO:0003700|GO:0006355
Vivi2g00782 459 CDD bZIP_HBP1b-like 174 225 - -
Vivi2g00782 459 SMART brlzneu 170 233 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00782 Vivi-Chr2 24188910 24192740 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00782 3 459 bZIP Transcription Factor Family AT1G68640 52.532 2.94e-149 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi2g00782 DOG1 1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00782 K14431 - gmx:100797393 594.349