Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00778 ATGGATGAGATTTCGTCTTCCACAAATGTCACTCAAGATGTTGGTTCAATCTCCGATGAAAATAAAGAATCGTGGCAACATTTTGTCTTCCACGACCTTTCATCAATCAAGGATTTCTACGCTAAATACGGTCATGAAAAGGGATTTTCTTTGAGAAAAAATTTGCACTCCTTCTATGATTCTCGTAACAAAAAAATGGACATTGTGCAATATGTCTGTTATGTTTGTAACAAGCATGGTTTCAAGTATGGGAGTCGGGCGGATCTTAAGAACAAGACAAACTCGGATACTCCTGTTCTCATTGAATATCATAAAGAGAAAGAACTTCCCGAGGAAAGGACCGGTTGCCCAGCTAGTATTTTGTTGAAGTATGATTCTAATGTTAAAGGTTATCACATATACAAATGGAATGTTACTCATAACCACCCTCTCCATAAACCCGAGCATTCGCATTACTTGAGATCGGCTCGAGAGATTAGTGAGCCTCAAAAATAA 495 0.3818 MDEISSSTNVTQDVGSISDENKESWQHFVFHDLSSIKDFYAKYGHEKGFSLRKNLHSFYDSRNKKMDIVQYVCYVCNKHGFKYGSRADLKNKTNSDTPVLIEYHKEKELPEERTGCPASILLKYDSNVKGYHIYKWNVTHNHPLHKPEHSHYLRSAREISEPQK 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00778 164 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 162 - -
Vivi2g00778 164 Pfam FAR1 DNA-binding domain 38 145 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00778 Vivi-Chr2 23969460 23969954 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi2g00778 FAR1 2.8e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00778 - - vvo:131648713 350.517