Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00772 ATGTACCGTGGCCTTTCACCAACGATACTGGCATTACTTCCAAACTGGGCGGTTTACTTCACATGTTATGAGCAACTAAAGGGCTTGCTCCGGTCACATGAGGGTTGCAACGAACTCACAACTATGGGAAATATTATAGCTGCTGCTGGTGCTGGGGCAGCAACAGCAATATCTACAAATCCATTATGGGTTGTTAAGACAAGACTCCAAACACAAGGAATGAGGCCTAATGTTGTTCCTTACAAGAGTGTTCTTTCCGCTTTGACGAGGATTACACGTGAGGAAGGTCTACGAGGACTATATAGTGGCATTGTGCCGTCATTAGCTGGCGTAAGTCATGTAGCGATTCAATTCCCAGCATACGAAAAGATAAAGTCATACATTGCTAAAAAAGAGAACACAACTGTTGACAACCTTAGTCCTGGGAATGTCGCTATTGCGTCATCAATTTCAAAAGTAACTGCCTCTGTAATGACTTATCCGCACGAGGTAATACGTTCCCGGCTGCAAGAGCAAGGTCATGCGAAAAATAGCAACGGATTTCAATATGCTGGGGTTATTGACTGTGCTAAGAAGGTGTTTCAAAAGGAAGGAATTTCAGGATTTTATCGGGGTTGCGCAACTAATCTATTAAGAACAACTCCATCTGCTGTTATTACATTCACCAGTTACGAGATGATACACAGGTTTTTGACACGGACTATACCACAAAACGAGCCTAAAAAACCCAAGCCTGAAGCCGGTGATATTAATACTAAAAATGGAGGTGACAGGGATCAATCGCCATCTCAATCTAACAACATTCCTCTCGGAAACAAAGAGCAGCTAACAAGACATTGA 840 0.4286 MYRGLSPTILALLPNWAVYFTCYEQLKGLLRSHEGCNELTTMGNIIAAAGAGAATAISTNPLWVVKTRLQTQGMRPNVVPYKSVLSALTRITREEGLRGLYSGIVPSLAGVSHVAIQFPAYEKIKSYIAKKENTTVDNLSPGNVAIASSISKVTASVMTYPHEVIRSRLQEQGHAKNSNGFQYAGVIDCAKKVFQKEGISGFYRGCATNLLRTTPSAVITFTSYEMIHRFLTRTIPQNEPKKPKPEAGDINTKNGGDRDQSPSQSNNIPLGNKEQLTRH 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00772 279 MobiDBLite consensus disorder prediction 254 279 - -
Vivi2g00772 279 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 236 IPR044712 GO:0006862|GO:0055085
Vivi2g00772 279 ProSiteProfiles Solute carrier (Solcar) repeat profile. 139 230 IPR018108 -
Vivi2g00772 279 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 29 IPR018108 -
Vivi2g00772 279 MobiDBLite consensus disorder prediction 234 279 - -
Vivi2g00772 279 ProSiteProfiles Solute carrier (Solcar) repeat profile. 39 127 IPR018108 -
Vivi2g00772 279 MobiDBLite consensus disorder prediction 239 253 - -
Vivi2g00772 279 Pfam Mitochondrial carrier protein 39 131 IPR018108 -
Vivi2g00772 279 Pfam Mitochondrial carrier protein 139 232 IPR018108 -
Vivi2g00772 279 Pfam Mitochondrial carrier protein 1 32 IPR018108 -
Vivi2g00772 279 SUPERFAMILY Mitochondrial carrier 1 226 IPR023395 -
Vivi2g00772 279 Gene3D Mitochondrial carrier domain 1 242 IPR023395 -
Vivi2g00772 279 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 1 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00772 Vivi-Chr2 23724380 23727856 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00772 1 273 Chloroplast and Mitochondria Gene Families AT1G25380 63.542 8.84e-122 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00772 K15115 - gmx:100797064 442.965