Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00767 ATGGTTGTTGGAAAATCTGGCTATGAACCTGACATTGGAACAGTGAAGGATAATAAGATGCAGAAGATGCGCAATTGTACACATCCATTTTCATGGGTAGGGTTGCCGTGGACATGTAGGAAAAGAAGAAATCACTATCAGTCATTTGAACGGAATGGTTTTCAGATATCTGTGAATGATTTTGTGTTTGTTTTAGCAGAAGAGAACAAACGTCTGGTTGCCTACTTGGAAGACCTGTACGAGGATTCCAGAGGCAACAGGATGGTTGTGGTTCGCTGGTTTCACAGAATTGATGAGGTTGGTATTGTTTTACCTCACAGTTTTAGTGACAGAGAAGTTTTGTTTTCTCTTTTTCTTCAAGATCTGAGTATTGAATGCATAGATGGTTTGACTTCCGTCCTCAGTCCCCAGCACTATGCAATGTATCGGAATGAAGTTCATCACGCCTGTCCAGAACCATTTGTGTGCAGCAACAAGTTTGATAATGATGATGTCAAACCCTTTGATATAACTCAAATTAAGGGTTACTGGAGACAGGAAATACTGAGGCAAATGTGTGCCAACTCTGACTTAAAGTCTAATGGGAGCTCAGGGCAATCAAAAGATGGCCCAAAACTTGAAGAAAATCTCCCGTCCATTTCTGGGATCAGACCTATGAAGAGACAGCGTTGTACAAAAGTTGACGGAACAGATGCTGTTGAGTTAGTTGCCCTTAAATCGGAAAATTTAAGTAACGGTAAGATTGATGCCAAAACCAGCAATGGAAACAATTCATTAAAACTGGCTGGGTCCACCAAGATGGCCACCATCAAAGAGGCAAATGAACCTGCTTCGCATTATTTAGCTGTAGGTTCCAATATTGAGGTCCTCTCTCAAGACAGTGGAATTAGAGGATGTTGGTTTAGAGCTTCAGTTATCAAAAAGAGCAAAGATAAAGTGAAGGTGCAATATTACGACCTTCAGGATGCAGAGGATGAAGCTAAGAAGCTTGAGGAATGGATTTTAGCTTCTAGAATTGTGGTACCTGATGATCTGGGTCTCCGATTACCCGAGAGGACCAAGATCCGACCACAGTCAAACAAACGTGGAATGTCCTTTGTTGCTGATGTTGGTTACATTGTTGATGCCTGGTGGCATGATGGATGGTGGGAAGGCATTGTTGTTCAAAAAGAGTCTGATGCCAAATATCGTGTCAAATATCACGTTTATTTCCCAGGTGAAAAGACGGTCTCAATTTTTGGTCCTAGTAATTTACGGCATTCTCGAGATTGGACAGGGAATGAGTGGGTTAAATTAAGGCAAAGGCCAGATGTTGTTACTTCTAAATTATCATTTTCAAGCTTGAAAGAAAAACAAAATTTATCCAATGGAAGTTCAAACGCTGCACCTATGGGGGATGGAATACAATCTAAGCAGACTGATATTTACTCAGGTTCTTCTGAAAGGGATAAACTTATTAGAAAGCCCGAGGTTGTTCCAGATCTTTTGAAGGATGTTTTGTTATCCCAGTTAAGGTGGAAGTCATCCCGGAAAAGGAATCAAGGTGGTAGTACCTCTCACCAGAAGCAAAAGTGCAGTGATAGACCCAGGAAATTGTCCCCAGCGTTTATGGAGTCTGAAGATTCAGATAGTTTTGTGATTCCAGCTTCATTGAAAGGTGACCATGACCATGATGACTACAAATACCAGGGAGATCCTTCCATTTTCAGTTCCTCGGTCGTCCCATCTTTAACCAACATGGTTATGTGTAGATGA 1755 0.4137 MVVGKSGYEPDIGTVKDNKMQKMRNCTHPFSWVGLPWTCRKRRNHYQSFERNGFQISVNDFVFVLAEENKRLVAYLEDLYEDSRGNRMVVVRWFHRIDEVGIVLPHSFSDREVLFSLFLQDLSIECIDGLTSVLSPQHYAMYRNEVHHACPEPFVCSNKFDNDDVKPFDITQIKGYWRQEILRQMCANSDLKSNGSSGQSKDGPKLEENLPSISGIRPMKRQRCTKVDGTDAVELVALKSENLSNGKIDAKTSNGNNSLKLAGSTKMATIKEANEPASHYLAVGSNIEVLSQDSGIRGCWFRASVIKKSKDKVKVQYYDLQDAEDEAKKLEEWILASRIVVPDDLGLRLPERTKIRPQSNKRGMSFVADVGYIVDAWWHDGWWEGIVVQKESDAKYRVKYHVYFPGEKTVSIFGPSNLRHSRDWTGNEWVKLRQRPDVVTSKLSFSSLKEKQNLSNGSSNAAPMGDGIQSKQTDIYSGSSERDKLIRKPEVVPDLLKDVLLSQLRWKSSRKRNQGGSTSHQKQKCSDRPRKLSPAFMESEDSDSFVIPASLKGDHDHDDYKYQGDPSIFSSSVVPSLTNMVMCR 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00767 584 ProSiteProfiles BAH domain profile. 54 171 IPR001025 GO:0003682
Vivi2g00767 584 SMART agenet_At_2 279 345 IPR014002 -
Vivi2g00767 584 SMART agenet_At_2 366 426 IPR014002 -
Vivi2g00767 584 SMART BAH_4 54 171 IPR001025 GO:0003682
Vivi2g00767 584 MobiDBLite consensus disorder prediction 450 483 - -
Vivi2g00767 584 MobiDBLite consensus disorder prediction 523 537 - -
Vivi2g00767 584 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 266 506 - -
Vivi2g00767 584 MobiDBLite consensus disorder prediction 190 212 - -
Vivi2g00767 584 MobiDBLite consensus disorder prediction 507 543 - -
Vivi2g00767 584 Pfam BAH domain 56 162 IPR001025 GO:0003682
Vivi2g00767 584 CDD Tudor_Agenet_AtDUF_rpt1_3 281 339 - -
Vivi2g00767 584 Gene3D - 26 170 IPR043151 -
Vivi2g00767 584 Pfam Agenet domain 284 357 IPR008395 -
Vivi2g00767 584 MobiDBLite consensus disorder prediction 450 476 - -
Vivi2g00767 584 MobiDBLite consensus disorder prediction 507 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00767 Vivi-Chr2 23316613 23319866 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00767 279 424 PHD Transcription Factor Family AT5G58610 26.490 3.52e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00767 - - tpra:123911674 844.728