Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00766 ATGGCTTTGAAAGAGAGATTTTGTGAAGAACGTTACGTAAGCTGGGAAGAGGTAGTGGTGTCGATGGATAAGGGTAGGAGGGAGGTTCGTTATTTTCTGAAAAAGAAGGGCGGTGGTTCGGATCTCGCTCTTATAGGTAAAGAGACGAGTTCCAGGCATATGTCTTATCACTATGCTATAAGAGACTCTTCTTTAGGGCCTTTTTTTAAACTCAAATCGCGTAGACACGTTCTTGATTGGTTGGATTCTATCGTTTCAGATTCTTCTTCCAGGGAAGCGACTATGGTTGTTGGAAAATCTGGCTATGAACCTGACATTGGAACAGTGAAGGATAATAAGATGCAGAAGATGCGCAATTGTACACATCCATTTTCATGGGTAGGGTTGCCGTGGACATGTAGGAAAAGAAGAAATCACTATCAGTCATTTGAACGGAATGGTTTTCAGATATCTGTGAATGATTTTGTGTTTGTTTTAGCAGAAGAGAACAAACGTCTGGTTGCCTACTTGGAAGACCTGTACGAGGATTCCAGAGGCAACAGGATGGTTGTGGTTCGCTGGTTTCACAGAATTGATGAGGTTGGTATTGTTTTACCTCACAGTTTTAGTGACAGAGAAGTTTTGTTTTCTCTTTTTCTTCAAGATCTGAGTATTGAATGCATAGATGGTTTGACTTCCGTCCTCAGTCCCCAGCACTATGCAATGTATCGGAATGAAGTTCATCACGCCTGTCCAGAACCATTTGTGTGCAGCAACAAGTTTGATAATGATGATGTCAAACCCTTTGATATAACTCAAATTAAGGGTTACTGGAGACAGGAAATACTGAGGCAAATGTGTGCCAACTCTGACTTAAAGTCTAATGGGAGCTCAGGGCAATCAAAAGATGGCCCAAAACTTGAAGAAAATCTCCCGTCCATTTCTGGGATCAGACCTATGAAGAGACAGCGTTGTACAAAAGTTGACGGAACAGATGCTGTTGAGTTAGTTGCCCTTAAATCGGAAAATTTAAGTAACGGTAAGATTGATGCCAAAACCAGCAATGGAAACAATTCATTAAAACTGGCTGGGTCCACCAAGATGGCCACCATCAAAGAGGCAAATGAACCTGCTTCGCATTATTTAGCTGTAGGTTCCAATATTGAGGTCCTCTCTCAAGACAGTGGAATTAGAGGATGTTGGTTTAGAGCTTCAGTTATCAAAAAGAGCAAAGATAAAGTGAAGGTGCAATATTACGACCTTCAGGATGCAGAGGATGAAGCTAAGAAGCTTGAGGAATGGATTTTAGCTTCTAGAATTGTGGTACCTGATGATCTGGGTCTCCGATTACCCGAGAGGACCAAGATCCGACCACAGTCAAACAAACGTGGAATGTCCTTTGTTGCTGATGTTGGTTACATTGTTGATGCCTGGTGGCATGATGGATGGTGGGAAGGCATTGTTGTTCAAAAAGAGTCTGATGCCAAATATCGTGTCAAATATCACGTTTATTTCCCAGGTGAAAAGACGGTCTCAATTTTTGGTCCTAGTAATTTACGGCATTCTCGAGATTGGACAGGGAATGAGTGGGTTAAATTAAGGCAAAGGCCAGATGTTGTTACTTCTAAATTATCATTTTCAAGCTTGAAAGAAAAACAAAATTTATCCAATGGAAGTTCAAACGCTGCACCTATGGGGGATGGAATACAATCTAAGCAGACTGATATTTACTCAGGTTCTTCTGAAAGGGATAAACTTATTAGAAAGCCCGAGGTTGTTCCAGATCTTTTGAAGGATGTTTTGTTATCCCAGTTAAGGTGGAAGTCATCCCGGAAAAGGAATCAAGGTGGTAGTACCTCTCACCAGAAGCAAAAGTGCAGTGATAGACCCAGGAAATTGTCCCCAGCGTTTATGGAGTCTGAAGATTCAGATAGTTTTGTGATTCCAGCTTCATTGAAAGGTGACCATGACCATGATGACTACAAATACCAGGGAGATCCTTCCATTTTCAGTTCCTCGGTCGTCCCATCTTTAACCAACATGGTTATGTGTAGATGA 2037 0.4158 MALKERFCEERYVSWEEVVVSMDKGRREVRYFLKKKGGGSDLALIGKETSSRHMSYHYAIRDSSLGPFFKLKSRRHVLDWLDSIVSDSSSREATMVVGKSGYEPDIGTVKDNKMQKMRNCTHPFSWVGLPWTCRKRRNHYQSFERNGFQISVNDFVFVLAEENKRLVAYLEDLYEDSRGNRMVVVRWFHRIDEVGIVLPHSFSDREVLFSLFLQDLSIECIDGLTSVLSPQHYAMYRNEVHHACPEPFVCSNKFDNDDVKPFDITQIKGYWRQEILRQMCANSDLKSNGSSGQSKDGPKLEENLPSISGIRPMKRQRCTKVDGTDAVELVALKSENLSNGKIDAKTSNGNNSLKLAGSTKMATIKEANEPASHYLAVGSNIEVLSQDSGIRGCWFRASVIKKSKDKVKVQYYDLQDAEDEAKKLEEWILASRIVVPDDLGLRLPERTKIRPQSNKRGMSFVADVGYIVDAWWHDGWWEGIVVQKESDAKYRVKYHVYFPGEKTVSIFGPSNLRHSRDWTGNEWVKLRQRPDVVTSKLSFSSLKEKQNLSNGSSNAAPMGDGIQSKQTDIYSGSSERDKLIRKPEVVPDLLKDVLLSQLRWKSSRKRNQGGSTSHQKQKCSDRPRKLSPAFMESEDSDSFVIPASLKGDHDHDDYKYQGDPSIFSSSVVPSLTNMVMCR 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00766 678 CDD Tudor_Agenet_AtDUF_rpt1_3 375 433 - -
Vivi2g00766 678 Pfam Agenet domain 378 451 IPR008395 -
Vivi2g00766 678 Gene3D - 120 264 IPR043151 -
Vivi2g00766 678 MobiDBLite consensus disorder prediction 544 570 - -
Vivi2g00766 678 MobiDBLite consensus disorder prediction 601 616 - -
Vivi2g00766 678 SMART agenet_At_2 373 439 IPR014002 -
Vivi2g00766 678 SMART agenet_At_2 460 520 IPR014002 -
Vivi2g00766 678 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 360 600 - -
Vivi2g00766 678 SMART BAH_4 148 265 IPR001025 GO:0003682
Vivi2g00766 678 Pfam BAH domain 150 256 IPR001025 GO:0003682
Vivi2g00766 678 ProSiteProfiles BAH domain profile. 148 265 IPR001025 GO:0003682
Vivi2g00766 678 MobiDBLite consensus disorder prediction 544 577 - -
Vivi2g00766 678 MobiDBLite consensus disorder prediction 617 631 - -
Vivi2g00766 678 MobiDBLite consensus disorder prediction 601 637 - -
Vivi2g00766 678 MobiDBLite consensus disorder prediction 284 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00766 Vivi-Chr2 23316613 23320138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00766 373 518 PHD Transcription Factor Family AT5G58610 26.490 4.86e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00766 - - tpra:123911674 984.941