Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00759 ATGGAAGATCAAATCCACAACAACAACACTAGAACAATAAACTCCAATTCTACCACGTGCTTAAAACTCTTTGGCTTCAGCGTCCACGAAGAAAACGATCACCAACAACCACTACCACCATTTGAAGACGGTACCGGAAACACTTCACCGTCTGGCTCCACTGAATCCGTCAGCGGAGACGGCGGTGCTTCAAGTTTAAACCCTACCTCCGGCGACCGGAAATACGAGTGTCAGTATTGCTGTCGAGAATTCGCAAACTCTCAAGCACTTGGCGGACACCAAAACGCTCACAAAAAAGAGCGCCAACAGCTCAAACGCGCACAGTTACAAGCTTCACGAAACGCCGCCGTTTCGTTTGTTCGGAACCCGATTATCTCCGCCTTTGCACCGCCTCCACATCTGCTTTCTTCGTCTGGACAAGTTATGATGCCGACTGTTCCTCCGTCGTGGGTCTACATGCCGCCACGCACAGCGCCTCCTCCTTTCCATGTATCCGTTTCACACGGTTGCGCTTTCCCGTCGGTGAACAACAGTAACAACGGTATTAGTAACTGTAACGGTGGAGGTGGTAGCAATTATAGCTTTATGACGAGTGCAAGATCTGCTGGTGCAGGTTTGTTACCGTGTGTTAGCGGAGTAGGGGATTCTTCTGCTGCATTGTCAACGATGGGCTCACAATTTGGGAAACTTGATGGGCCATCTTTGAGTAGGTTCTCACAAGGAGATGTAGGGCCTAACTTTGATGATGGATTCGGTTTGGATTTGCATCTTAGTCTATCCCCGCCTTAA 789 0.493 MEDQIHNNNTRTINSNSTTCLKLFGFSVHEENDHQQPLPPFEDGTGNTSPSGSTESVSGDGGASSLNPTSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVSFVRNPIISAFAPPPHLLSSSGQVMMPTVPPSWVYMPPRTAPPPFHVSVSHGCAFPSVNNSNNGISNCNGGGGSNYSFMTSARSAGAGLLPCVSGVGDSSAALSTMGSQFGKLDGPSLSRFSQGDVGPNFDDGFGLDLHLSLSPP 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00759 262 Gene3D Classic Zinc Finger 56 122 - -
Vivi2g00759 262 PANTHER ZINC FINGER PROTEIN 5 1 261 IPR044299 GO:0010090
Vivi2g00759 262 SUPERFAMILY beta-beta-alpha zinc fingers 71 102 IPR036236 -
Vivi2g00759 262 ProSitePatterns Zinc finger C2H2 type domain signature. 77 97 IPR013087 -
Vivi2g00759 262 MobiDBLite consensus disorder prediction 32 69 - -
Vivi2g00759 262 FunFam Zinc finger protein 6 63 125 - -
Vivi2g00759 262 ProSiteProfiles Zinc finger C2H2 type domain profile. 75 102 IPR013087 -
Vivi2g00759 262 MobiDBLite consensus disorder prediction 41 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00759 Vivi-Chr2 23101748 23103312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00759 14 261 C2H2 Transcription Factor Family AT1G68360 44.776 2.13e-53 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00759 - - tpra:123911684 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g00759 2 23101748 23103312 Vivi2g00759 2 23101748 23103312 ECH