Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00723 ATGGTTAAGACAGAGATCAACAAGATCAACAAAGAGAAAACAAAACAAATGGCACAAAAAACATCATCATCAACATCAAGAAATGTTTCAAATGAGATGAAGAAAAAGTACAAAGGAGTTAGAATGAGGAGTTGGGGTTCTTGGGTTTCAGAAATTAGAGCACCAAATCAAAAAACAAGAATATGGTTAGGTTCTTATTCAACTGCTGAAGCTGCAGCTAGAGCCTATGATGCAGCACTTTTATGTCTCAAAGGTTCATCAGCATCAAATCTCAATTTCCCTTTAGAATGTTCTTCACATTTCATTCCTCAAGACAACATTGCTATGTCACCTAAATCAATCCAAAGAGTAGCTGCATCTGCGGCCGCTGCAGCATCTGTAGCGGTCGAATCTGCTGCTACCGGTGTTGATAGTAAGAACAATAAAATTGCTATTATCACCTCCCCAACATCTCCACCCAATCATGTTTCATCATCTTCATTGGTTTCATCTCCATCAATGTCATGTTCTCCTTCTAACCAAATTGATGATGATGTTTCACTTTTTTCTTCTTTTGGGGCCTACACTAATGATCATCAAGCAACAAATGAATCAATGGCTATGAGCATGAATATGAATATGATGGATTGTTGGTATGGTTTTGATGGGTTAGAATCTCCAAAACATTTTGATCAAATGCTAAATGGTTCTTTGTTTGATATTGATTCAACTCAAGTGCTTCTTGATGATTGGTATGAAGAAGGTGACATTAATTTGTGGAGCTTCTACTAA 771 0.3684 MVKTEINKINKEKTKQMAQKTSSSTSRNVSNEMKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSASNLNFPLECSSHFIPQDNIAMSPKSIQRVAASAAAAASVAVESAATGVDSKNNKIAIITSPTSPPNHVSSSSLVSSPSMSCSPSNQIDDDVSLFSSFGAYTNDHQATNESMAMSMNMNMMDCWYGFDGLESPKHFDQMLNGSLFDIDSTQVLLDDWYEEGDINLWSFY 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00723 256 SMART rav1_2 36 100 IPR001471 GO:0003700|GO:0006355
Vivi2g00723 256 MobiDBLite consensus disorder prediction 1 15 - -
Vivi2g00723 256 MobiDBLite consensus disorder prediction 147 171 - -
Vivi2g00723 256 PRINTS Ethylene responsive element binding protein signature 59 75 IPR001471 GO:0003700|GO:0006355
Vivi2g00723 256 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Vivi2g00723 256 SUPERFAMILY DNA-binding domain 36 95 IPR016177 GO:0003677
Vivi2g00723 256 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 203 - -
Vivi2g00723 256 CDD AP2 35 94 IPR001471 GO:0003700|GO:0006355
Vivi2g00723 256 Pfam AP2 domain 36 85 IPR001471 GO:0003700|GO:0006355
Vivi2g00723 256 FunFam ethylene-responsive transcription factor ERF014-like 35 96 - -
Vivi2g00723 256 MobiDBLite consensus disorder prediction 16 30 - -
Vivi2g00723 256 Gene3D AP2/ERF domain 35 96 IPR036955 GO:0003700|GO:0006355
Vivi2g00723 256 ProSiteProfiles AP2/ERF domain profile. 36 94 IPR001471 GO:0003700|GO:0006355
Vivi2g00723 256 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00723 Vivi-Chr2 21127263 21128453 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00723 37 255 AP2-EREBP Transcription Factor Family AT1G21910 44.843 7.97e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Vivi2g00723 AP2 5.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00723 - - mtr:11436027 316.62