Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00691 ATGGCTGAAGAACAGTTTCAACCTAGTGGAAATTGGTGGGAGACACCAGCTAGAAACATGAGATTTGAAAGTGTTGAACAACAACAACAACAGCAACAACAATCTTCTTCCTTTGGTGGTTGGCAGCAGCAGCAACAACAACATCATGATACTATGTCTGCTTCCGGTAGTTCTTCGGTTGTTTTTCATGAAAAGCTTCAACCTTCAGATTCTTCTACTTCAAATAATGACAACAACAACAACAATAACTTGCATATGATGAATTTAGGACTTTCATCTCAAACCATTGATTGGAATCAAGCATCTTTACTAAGTGACAAGGCTTCAGAAGGAAGTTTTAGGTCTATGCTGCAAGAGAATTTGAATTCATCAAGCACAAATTTTGATCAAGAAACTGGATTGAGTCATTGGAGACAAGAATCTTGTAATAATAACAATGAATTCAAGCAAGTGAATAGAGGTTTCTCTTTGGATCAAACACAGTTTAGTCCTCAATATAGTTCAGGAGATAGTAACATGATAAGCCAATTGGATTCTTCAGCTTTGTATGGTAACCCTTCCATGTTACAAGGACTTTTAGGAACTGAAACTAATCAAATTCAACCTCAACATGGTAATAGTTCCATGAATTTTCCTTATTCGTCAACGAGCTTCGGTTTGAGTTCAAATGATTTAATTCCTTCTTGGTCTAAAATACCTCAACAAAAACAACAACAACAATTGCATTTCACCAATAACGCTCCTTTCTGGAATGCTTCGGAGTCGAGTATTAAAGATTCTTCATCTAGCTTCTTGCCTCCATTTTCCAATCCAAATTTTGGTGCACAAACAAAGAATATATCTGAAGGTAGGGACCCAAGTGGTGTGGTGAAGAAAAGTGGGAGTGAGCCTGCACCAAAAAGGTCCAGAAATGAAACCCCATCACCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAAATGGGGGACAGAATCACTGCACTTCAACAATTGGTTTCACCTTTTGGAAAGACTGATACAGCCTCAGTGCTCTCTGAAGCAATTGAATATATCAAGTTTCTTCATGAACAAGTGACTATTTTAAGCACACCATATATGAAAAGTGGTGCTCCAATCCAACATCAACAGGGTTGTGGTAAATCTAAGGAAGTAGAGGGTCCAAAGCAAGATCTTAGAAGCAGAGGGTTGTGCTTAGTACCAGTTTCTAGTACGTTTCCAATGACTCATGAACCCACAGTTGAATATTGGACACCAACATTTGGAGGAACTTTCAGATAA 1275 0.382 MAEEQFQPSGNWWETPARNMRFESVEQQQQQQQQSSSFGGWQQQQQQHHDTMSASGSSSVVFHEKLQPSDSSTSNNDNNNNNNLHMMNLGLSSQTIDWNQASLLSDKASEGSFRSMLQENLNSSSTNFDQETGLSHWRQESCNNNNEFKQVNRGFSLDQTQFSPQYSSGDSNMISQLDSSALYGNPSMLQGLLGTETNQIQPQHGNSSMNFPYSSTSFGLSSNDLIPSWSKIPQQKQQQQLHFTNNAPFWNASESSIKDSSSSFLPPFSNPNFGAQTKNISEGRDPSGVVKKSGSEPAPKRSRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTILSTPYMKSGAPIQHQQGCGKSKEVEGPKQDLRSRGLCLVPVSSTFPMTHEPTVEYWTPTFGGTFR 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00691 424 CDD bHLH_AtbHLH_like 310 361 IPR045239 -
Vivi2g00691 424 SMART finulus 315 359 IPR011598 GO:0046983
Vivi2g00691 424 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 94 405 - -
Vivi2g00691 424 MobiDBLite consensus disorder prediction 1 86 - -
Vivi2g00691 424 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 314 371 IPR036638 GO:0046983
Vivi2g00691 424 Gene3D - 314 373 IPR036638 GO:0046983
Vivi2g00691 424 MobiDBLite consensus disorder prediction 261 283 - -
Vivi2g00691 424 FunFam Transcription factor bHLH123 family 314 376 - -
Vivi2g00691 424 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 304 353 IPR011598 GO:0046983
Vivi2g00691 424 MobiDBLite consensus disorder prediction 261 312 - -
Vivi2g00691 424 MobiDBLite consensus disorder prediction 21 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00691 Vivi-Chr2 19280532 19284845 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00691 106 424 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 45.288 6.65e-73 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00691 - - gmx:100818424 508.449