Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g00686 | ATGGACATTATTGGTATTCTTAACTCCATAGTTTTCATTGCTTTATGCATATTTATACCTTCTCCAAAATTTTCCATAGCAGTAGATACTATAAAACTCTCCCAGTCCATCACTGATGGCATGACCTTGGTTTCACAAGGTGACAAATTTGTACTTGGTTTCTTCAGTCCTTTGGGTTCCAACAAAACATACTTAGGAATCTGGTACAAGAATATCCCCAAGAAAACAATTGTTTGGGTTGCAAATGGTGTCGAACCCATCAACGGTTCCTCCTCCGGAACCTCCGGGATCCTAACACTAAACAACACTGGCAACCTTGTCCTCAAACAAAATGATAAAGTAATATGGTATACAACGTCTCAACAAGGTTCCCTGAATCCAGTTGCGCAACTTCTGGATTCGGGGAATCTTGTGGTAAGAAACGAGAAGGAGACAACGAGAGGAGCCTATTTGTGGCAGAGTTTTGATTACCCTTGTGATACAATACTTCCGGGGATGAAGTTGGGATGGAATCTTAGAACTCGTACAGAGAAGAGAATGACGTCTTGGAAAAGTCCTGATGATCCGTCACCGGGAGACTTATATTGGGGTTCATTACTTTATAATTACCCTGAACAATATCTTATGAAAGGAGCAAAGAAATTTGTAAGAATTGGCCCATGGAATGGATTGCACTTCAGTGGTGTACCAGGTCAAAAGCCTAACAACATATATGCTTACAAGTTTGTGTCTAATAAGGATGAGATGTATTATAGTTATACTATGGAGAATGATTCTGTAATTACAAGAATGATGATAAATCAAACAATTCCGTTGTATTCTCGTACCGTATGGTTGGAAGATCAACAAACTTGGCAAATTATGAAATCAATGCCTAAAGACAGTTGTGACTATTATGGAATCTGTGGAGCCTATGGTACTTGCATAATCTCAGCCTCACAGATATGCAATTGTTTAACAGGGTTTAGCCCGAAATCTCCGGCTGCTTGGAACAAAACTGACTGGACTCAAGGATGCGTCCGAAATAAACCGTTAAACTGTACTAACAAACTCAAGGACGGATTTGTGAAAGTGGAAGGTGTAAAACTGCCAGATTGTACACATACTTGGGTAGATGAAACAATAGGTCTAAATGAATGTAAAGCCAAATGCTTGAATAATTGTTCTTGTATGGCTTACACTAATTCTAACATATCAGGAAAAGGTAGTGGTTGTGTCATGTGGTTTGGTGATTTGATTGATCTTAGGAAGTTTGAAGACGAAGGACAGGATCTCTATATTCGAATGGATGCTTCCGAATTAGGCAGAGAGGGACATAATCGGCTCGCGAAGGATCTGATAAGAATTCTTGCTAGCATCATTATAGTTTCTGGGATACTTTTTCTTGGATATCGTCGCTACATATTGCGGCGCAGAGTAATTGAGGATTCGGAAATTATTGAACTGGAAGGTGGCAGAGGAAGTGAAGATGAAGGTGATATCGATCTCCCAATGCTTGCGTATTCAACTTTAGTCACTGCCACAGATAACTTCTCGATAAAGAACAAGATTGGAGAAGGTGGTTTTGGACCGGTATACAAGGGAAGATTTGCATGGGGGCAAGAAATTGCTGTGAAGAGGCTTTCAAGTGACTCTGGACAGGGAATTACTGAGTTAAAGAATGAAATAAAGCTTATAGCAAAACTTCAACATCGAAATCTTGTTAAACTACTTGGTTGTTGCATAGAGGAAGAAAATAGAGTGCTAGTTTATGAATACATGAAAAACCGTAGCTTGAATATGTTGATTTTCGATGACACTAAAAGGAAACTCTTAGATTGGCCTAAGCGCTTTAACATTATTTGCGGAATCGCTCGAGGTCTTCTTTACCTTCATCAAGATTCTAGGTTAAGGATTATTCATAGAGACCTCAAACCAAGCAATATTTTGCTTGATGACAAGTTGATCCCGAAAATCTCAGATTTTGGCATAGCTAGAATTTTTGGATTAGATCAAACACATGGAAATACAAAGAGAGTGGTTGGAACTTATGGCTACATGGCACCAGAATATGCCGCAGATGGACTTTATTCTGTGAAGTCAGATGTGTTTAGTTTCGGAATTTTGATGTTGGAAATTATATGTGGAAAGAGAAGTAGAGGTTTTTATGTCGACAACGACTCTCCAAACCTTGCCACTCATGCATGGAGTTTATGGAAAAAGGGAAGAGCTATAGAACTAATTGACAAAGGCATAGAGGACTCTTGTGTTGAATCAGAGGCATTGCGTTGCATTCATGTGAGTCTCTTGTGTATCCAGCAATTTCCTGAGGATAGGCCTAATATGCCTTCTGTGGTTCTAATGTTGGGGAGTGATGGTGAATTTTTTGAGCCTAAAAAACCTGGTTACTATGTAATAAAGAAAGATTCATCTGCAGAAACATCCAACTCAGGTCAAAGTGAAAAGATCACTACCAATGATATGACTATCACCTTATTAGAAGCCCGGTGA | 2490 | 0.392 | MDIIGILNSIVFIALCIFIPSPKFSIAVDTIKLSQSITDGMTLVSQGDKFVLGFFSPLGSNKTYLGIWYKNIPKKTIVWVANGVEPINGSSSGTSGILTLNNTGNLVLKQNDKVIWYTTSQQGSLNPVAQLLDSGNLVVRNEKETTRGAYLWQSFDYPCDTILPGMKLGWNLRTRTEKRMTSWKSPDDPSPGDLYWGSLLYNYPEQYLMKGAKKFVRIGPWNGLHFSGVPGQKPNNIYAYKFVSNKDEMYYSYTMENDSVITRMMINQTIPLYSRTVWLEDQQTWQIMKSMPKDSCDYYGICGAYGTCIISASQICNCLTGFSPKSPAAWNKTDWTQGCVRNKPLNCTNKLKDGFVKVEGVKLPDCTHTWVDETIGLNECKAKCLNNCSCMAYTNSNISGKGSGCVMWFGDLIDLRKFEDEGQDLYIRMDASELGREGHNRLAKDLIRILASIIIVSGILFLGYRRYILRRRVIEDSEIIELEGGRGSEDEGDIDLPMLAYSTLVTATDNFSIKNKIGEGGFGPVYKGRFAWGQEIAVKRLSSDSGQGITELKNEIKLIAKLQHRNLVKLLGCCIEEENRVLVYEYMKNRSLNMLIFDDTKRKLLDWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKPSNILLDDKLIPKISDFGIARIFGLDQTHGNTKRVVGTYGYMAPEYAADGLYSVKSDVFSFGILMLEIICGKRSRGFYVDNDSPNLATHAWSLWKKGRAIELIDKGIEDSCVESEALRCIHVSLLCIQQFPEDRPNMPSVVLMLGSDGEFFEPKKPGYYVIKKDSSAETSNSGQSEKITTNDMTITLLEAR | 829 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g00686 | 829 | Gene3D | Phosphorylase Kinase; domain 1 | 489 | 586 | - | - | |
Vivi2g00686 | 829 | Pfam | D-mannose binding lectin | 76 | 184 | IPR001480 | - | |
Vivi2g00686 | 829 | ProSiteProfiles | Bulb-type lectin domain profile. | 28 | 152 | IPR001480 | - | |
Vivi2g00686 | 829 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 24 | 155 | - | - | |
Vivi2g00686 | 829 | ProSiteProfiles | Protein kinase domain profile. | 511 | 789 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi2g00686 | 829 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 587 | 790 | - | - | |
Vivi2g00686 | 829 | Pfam | Domain of unknown function (DUF3403) | 790 | 829 | IPR021820 | GO:0004674 | |
Vivi2g00686 | 829 | SMART | serkin_6 | 511 | 789 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi2g00686 | 829 | Gene3D | - | 24 | 155 | IPR036426 | - | |
Vivi2g00686 | 829 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 478 | 586 | - | - | |
Vivi2g00686 | 829 | SMART | ntp_6 | 350 | 429 | IPR003609 | - | |
Vivi2g00686 | 829 | SMART | blect_4 | 34 | 158 | IPR001480 | - | |
Vivi2g00686 | 829 | Pfam | S-locus glycoprotein domain | 217 | 326 | IPR000858 | GO:0048544 | |
Vivi2g00686 | 829 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 77 | 189 | IPR036426 | - | |
Vivi2g00686 | 829 | ProSiteProfiles | PAN/Apple domain profile. | 347 | 430 | IPR003609 | - | |
Vivi2g00686 | 829 | CDD | STKc_IRAK | 517 | 782 | - | - | |
Vivi2g00686 | 829 | PIRSF | SRK | 1 | 829 | IPR024171 | GO:0004674 | |
Vivi2g00686 | 829 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 12 | 773 | - | - | |
Vivi2g00686 | 829 | Pfam | Protein kinase domain | 512 | 712 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi2g00686 | 829 | Gene3D | Transferase(Phosphotransferase) domain 1 | 587 | 789 | - | - | |
Vivi2g00686 | 829 | SUPERFAMILY | Protein kinase-like (PK-like) | 496 | 782 | IPR011009 | - | |
Vivi2g00686 | 829 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 632 | 644 | IPR008271 | GO:0004672|GO:0006468 | |
Vivi2g00686 | 829 | Pfam | PAN-like domain | 347 | 415 | IPR003609 | - | |
Vivi2g00686 | 829 | CDD | PAN_AP_plant | 344 | 428 | - | - | |
Vivi2g00686 | 829 | CDD | B_lectin | 34 | 158 | IPR001480 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g00686 | Vivi-Chr2 | 19072242 | 19075727 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g00686 | 499 | 829 | Receptor kinase-like Gene Family | AT4G11530 | 52.819 | 9.84e-120 | 375 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vivi2g00686 | Pkinase | 4.4e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g00686 | - | - | gmx:100775648 | 1201.04 |