Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00686 ATGGACATTATTGGTATTCTTAACTCCATAGTTTTCATTGCTTTATGCATATTTATACCTTCTCCAAAATTTTCCATAGCAGTAGATACTATAAAACTCTCCCAGTCCATCACTGATGGCATGACCTTGGTTTCACAAGGTGACAAATTTGTACTTGGTTTCTTCAGTCCTTTGGGTTCCAACAAAACATACTTAGGAATCTGGTACAAGAATATCCCCAAGAAAACAATTGTTTGGGTTGCAAATGGTGTCGAACCCATCAACGGTTCCTCCTCCGGAACCTCCGGGATCCTAACACTAAACAACACTGGCAACCTTGTCCTCAAACAAAATGATAAAGTAATATGGTATACAACGTCTCAACAAGGTTCCCTGAATCCAGTTGCGCAACTTCTGGATTCGGGGAATCTTGTGGTAAGAAACGAGAAGGAGACAACGAGAGGAGCCTATTTGTGGCAGAGTTTTGATTACCCTTGTGATACAATACTTCCGGGGATGAAGTTGGGATGGAATCTTAGAACTCGTACAGAGAAGAGAATGACGTCTTGGAAAAGTCCTGATGATCCGTCACCGGGAGACTTATATTGGGGTTCATTACTTTATAATTACCCTGAACAATATCTTATGAAAGGAGCAAAGAAATTTGTAAGAATTGGCCCATGGAATGGATTGCACTTCAGTGGTGTACCAGGTCAAAAGCCTAACAACATATATGCTTACAAGTTTGTGTCTAATAAGGATGAGATGTATTATAGTTATACTATGGAGAATGATTCTGTAATTACAAGAATGATGATAAATCAAACAATTCCGTTGTATTCTCGTACCGTATGGTTGGAAGATCAACAAACTTGGCAAATTATGAAATCAATGCCTAAAGACAGTTGTGACTATTATGGAATCTGTGGAGCCTATGGTACTTGCATAATCTCAGCCTCACAGATATGCAATTGTTTAACAGGGTTTAGCCCGAAATCTCCGGCTGCTTGGAACAAAACTGACTGGACTCAAGGATGCGTCCGAAATAAACCGTTAAACTGTACTAACAAACTCAAGGACGGATTTGTGAAAGTGGAAGGTGTAAAACTGCCAGATTGTACACATACTTGGGTAGATGAAACAATAGGTCTAAATGAATGTAAAGCCAAATGCTTGAATAATTGTTCTTGTATGGCTTACACTAATTCTAACATATCAGGAAAAGGTAGTGGTTGTGTCATGTGGTTTGGTGATTTGATTGATCTTAGGAAGTTTGAAGACGAAGGACAGGATCTCTATATTCGAATGGATGCTTCCGAATTAGGCAGAGAGGGACATAATCGGCTCGCGAAGGATCTGATAAGAATTCTTGCTAGCATCATTATAGTTTCTGGGATACTTTTTCTTGGATATCGTCGCTACATATTGCGGCGCAGAGTAATTGAGGATTCGGAAATTATTGAACTGGAAGGTGGCAGAGGAAGTGAAGATGAAGGTGATATCGATCTCCCAATGCTTGCGTATTCAACTTTAGTCACTGCCACAGATAACTTCTCGATAAAGAACAAGATTGGAGAAGGTGGTTTTGGACCGGTATACAAGGGAAGATTTGCATGGGGGCAAGAAATTGCTGTGAAGAGGCTTTCAAGTGACTCTGGACAGGGAATTACTGAGTTAAAGAATGAAATAAAGCTTATAGCAAAACTTCAACATCGAAATCTTGTTAAACTACTTGGTTGTTGCATAGAGGAAGAAAATAGAGTGCTAGTTTATGAATACATGAAAAACCGTAGCTTGAATATGTTGATTTTCGATGACACTAAAAGGAAACTCTTAGATTGGCCTAAGCGCTTTAACATTATTTGCGGAATCGCTCGAGGTCTTCTTTACCTTCATCAAGATTCTAGGTTAAGGATTATTCATAGAGACCTCAAACCAAGCAATATTTTGCTTGATGACAAGTTGATCCCGAAAATCTCAGATTTTGGCATAGCTAGAATTTTTGGATTAGATCAAACACATGGAAATACAAAGAGAGTGGTTGGAACTTATGGCTACATGGCACCAGAATATGCCGCAGATGGACTTTATTCTGTGAAGTCAGATGTGTTTAGTTTCGGAATTTTGATGTTGGAAATTATATGTGGAAAGAGAAGTAGAGGTTTTTATGTCGACAACGACTCTCCAAACCTTGCCACTCATGCATGGAGTTTATGGAAAAAGGGAAGAGCTATAGAACTAATTGACAAAGGCATAGAGGACTCTTGTGTTGAATCAGAGGCATTGCGTTGCATTCATGTGAGTCTCTTGTGTATCCAGCAATTTCCTGAGGATAGGCCTAATATGCCTTCTGTGGTTCTAATGTTGGGGAGTGATGGTGAATTTTTTGAGCCTAAAAAACCTGGTTACTATGTAATAAAGAAAGATTCATCTGCAGAAACATCCAACTCAGGTCAAAGTGAAAAGATCACTACCAATGATATGACTATCACCTTATTAGAAGCCCGGTGA 2490 0.392 MDIIGILNSIVFIALCIFIPSPKFSIAVDTIKLSQSITDGMTLVSQGDKFVLGFFSPLGSNKTYLGIWYKNIPKKTIVWVANGVEPINGSSSGTSGILTLNNTGNLVLKQNDKVIWYTTSQQGSLNPVAQLLDSGNLVVRNEKETTRGAYLWQSFDYPCDTILPGMKLGWNLRTRTEKRMTSWKSPDDPSPGDLYWGSLLYNYPEQYLMKGAKKFVRIGPWNGLHFSGVPGQKPNNIYAYKFVSNKDEMYYSYTMENDSVITRMMINQTIPLYSRTVWLEDQQTWQIMKSMPKDSCDYYGICGAYGTCIISASQICNCLTGFSPKSPAAWNKTDWTQGCVRNKPLNCTNKLKDGFVKVEGVKLPDCTHTWVDETIGLNECKAKCLNNCSCMAYTNSNISGKGSGCVMWFGDLIDLRKFEDEGQDLYIRMDASELGREGHNRLAKDLIRILASIIIVSGILFLGYRRYILRRRVIEDSEIIELEGGRGSEDEGDIDLPMLAYSTLVTATDNFSIKNKIGEGGFGPVYKGRFAWGQEIAVKRLSSDSGQGITELKNEIKLIAKLQHRNLVKLLGCCIEEENRVLVYEYMKNRSLNMLIFDDTKRKLLDWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKPSNILLDDKLIPKISDFGIARIFGLDQTHGNTKRVVGTYGYMAPEYAADGLYSVKSDVFSFGILMLEIICGKRSRGFYVDNDSPNLATHAWSLWKKGRAIELIDKGIEDSCVESEALRCIHVSLLCIQQFPEDRPNMPSVVLMLGSDGEFFEPKKPGYYVIKKDSSAETSNSGQSEKITTNDMTITLLEAR 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00686 829 Gene3D Phosphorylase Kinase; domain 1 489 586 - -
Vivi2g00686 829 Pfam D-mannose binding lectin 76 184 IPR001480 -
Vivi2g00686 829 ProSiteProfiles Bulb-type lectin domain profile. 28 152 IPR001480 -
Vivi2g00686 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 155 - -
Vivi2g00686 829 ProSiteProfiles Protein kinase domain profile. 511 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00686 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 587 790 - -
Vivi2g00686 829 Pfam Domain of unknown function (DUF3403) 790 829 IPR021820 GO:0004674
Vivi2g00686 829 SMART serkin_6 511 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00686 829 Gene3D - 24 155 IPR036426 -
Vivi2g00686 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 478 586 - -
Vivi2g00686 829 SMART ntp_6 350 429 IPR003609 -
Vivi2g00686 829 SMART blect_4 34 158 IPR001480 -
Vivi2g00686 829 Pfam S-locus glycoprotein domain 217 326 IPR000858 GO:0048544
Vivi2g00686 829 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 189 IPR036426 -
Vivi2g00686 829 ProSiteProfiles PAN/Apple domain profile. 347 430 IPR003609 -
Vivi2g00686 829 CDD STKc_IRAK 517 782 - -
Vivi2g00686 829 PIRSF SRK 1 829 IPR024171 GO:0004674
Vivi2g00686 829 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 773 - -
Vivi2g00686 829 Pfam Protein kinase domain 512 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00686 829 Gene3D Transferase(Phosphotransferase) domain 1 587 789 - -
Vivi2g00686 829 SUPERFAMILY Protein kinase-like (PK-like) 496 782 IPR011009 -
Vivi2g00686 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Vivi2g00686 829 Pfam PAN-like domain 347 415 IPR003609 -
Vivi2g00686 829 CDD PAN_AP_plant 344 428 - -
Vivi2g00686 829 CDD B_lectin 34 158 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00686 Vivi-Chr2 19072242 19075727 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00686 499 829 Receptor kinase-like Gene Family AT4G11530 52.819 9.84e-120 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g00686 Pkinase 4.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00686 - - gmx:100775648 1201.04