Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00684 ATGGTTACCAAGAAAAACTGCAAAATGTCAACCTTTCCTTCTTCTCTGTTTCTTATCACTAACCTCCTATTATTATTCTTGTTCAAATTTTCCTCCGCAGCAGATACTATAACCCAATCAGAGTCACTTTCTGATGGTAAGACATTGATTTCAAAAGATGGAACCTTCGAGTTGGGTTTCTTCAATCCCGGTAGTTCCTCAAACCGCTACGTCGGAATGTGGTACAAAAACATACCGGTTAAAACCGTTGTTTGGGTTGCAAACCGTGATAATCCTATCAAGGACAACTCGAGCAAGTTGATCATAAACAAAGAAGGAAATCTCGTTCTTCTCAACGCCAGTCAGTCTGTTCTATGGTCAACAAACGCAACAAAGAAGGCTTCCACCCCAATCGTCCAGCTTCTGGACAACGGAAATTTAGTGATCAGAGATGAGGACAGCGAAAGAAATGAAGAGAATTTTTGTTGGCAAAGCTTTGACCATCCTAGTGACACGTTGTTACCAGAAATGAAGATCGGATGGGACAAGAAAACCGGTATTCAAACAATATTTACTGCATGGAAAAACTGGGAAGATCCATCTTTAGGTGATTTTACATCACTGATGAGCCGTAGTAATAATCCTGAAGTGGTTCTTATGAAAGGCTCAACGGAGTTCCACAGAACGGGACCGATGACCGGTACTACGGATAGTGGAGCATATGGATTGAAGGCTAACCCAATTTTTATTTCAGATGTTGTAAGCAGCGAAGACGAAGCCTATTTTTCGTACACGCTAAAGAACAAAACTCTGATTTCCATAGTTGTTTTAAACCAAACGCTTTTACTTCTTCAACGCCTTGTATGGATACCTGAATCTCGAAAATGGAGTAATTACATGAACCTACCACATGATACCTGTGATTCTTATAACGTTTGTGGAGCGTATGGAAATTGTGACATCAACGGATCGCCACTTTGTCAGTGTTTGGATGGTTTTAAGCCGAAATCGCCGCAACAGTGGAACACGATGGACTGGTCAGATGGATGTGTGCACACTGGAAATTGGAGCTGTGGAGTCAAGGGTAGAGACGGTTTCCTTAAGGTTACTGGAGGGAAGTTGCCGGATACTACGAATACTTGGGTTAATGCAAATATGACACTTGATGATTGCAAGCTCAAATGTCTGCAAAACTGTTCCTGCACAGCTTACTCAAGTTTAGGCCCAGATGACGATTCCGGAGGTTGTTCCCTATGGTTTAAAGATCTTAAAGATTTGAGAGTTTCAGATTCTCAGAGAAACTTCTATGTGCGTATTGATGCATCAGATATAGGTGATAAACGTGAGTATACAAAAATGATTATCTTGCTAGTTTCAATCGTTGTTGTTGCTTTCATTGTGATCATATTGGCACTATACTTTTATCGAGAGAAGATAAAACACAAAGGCAATAATGAAGGTGACCATGACGATTTAGACCTCCCTTTCTTTGATCTTGCTACAATACATGAAGCCACGAATTACTTCTCAAATTATAATAAATTGGGTGAAGGTGGTTTTGGACCCGTATACAAGGGTAAGTTGAAAGACGGTCAAGAAGTTGCTGTCAAAAAACTTTCAAGAAGTTCTAGCCAAGGATTGAAAGAATTTAAGAACGAAGTTATTTTATGTTCTAAACTTCAACATCGAAACCTTGTTAAAATAATTGGTTTTTGCGTTACAAAAGATGAAAAAATGTTGGTCTATGAGTATATGTCGAACACAAGCCTTGATTCATTTATTTTTGATCCAATTCAAAGCAAATTATTAGATTGGCCTTTGCGTTTCAACATCTTGTATGGAATTGCCCGAGGTCTTCTTTACTTGCATCAAGATTCAAGGTTAAGAATTGTTCACAGAGATTTGAAAGCGAGCAATGTTTTATTAGACAATGATATGCAACCAAAAATTTCGGATTTTGGTCTAGCTAAAATGTGTGGAGGTGACAAAGTGGAGGGTGAAACAAGTCGAATAGTCGGCACATACGGTTACATGGCGCCAGAATATGCCATTGACGGAGTATTCTCAGTTAAATCAGATGTATTTAGCTTTGGTGTCTTATTGCTAGAACTTATAAGTGGAAAGAAAAACAGAACCCTTACCTACAACCAAGATGATCACAATCTTATTGGACATGCATGGAAATTATGGAAAGAGGACAGCATACAGTCATTGATTGATGATAATTTGAAAGATACGTGCATTCTTCATGAAGCTTTGCGATGTATTCAAATAGGGCTTTTGTGTCTGCAACATCATCCTGATAATAGGCCAAATATGACATCTGTTGTTGTGATGTTGAGTAGTAATAATATTTTACCTGAACCACACGAACCAGGTTATTTATTACAAAATATAACAAGCGAAGGAGAACCTTCTTCTACCGAAAGACAAAGTTCTTCTTCAATAAATAATGTAACTATCTCACTACTAAATGCAAGATAG 2463 0.3845 MVTKKNCKMSTFPSSLFLITNLLLLFLFKFSSAADTITQSESLSDGKTLISKDGTFELGFFNPGSSSNRYVGMWYKNIPVKTVVWVANRDNPIKDNSSKLIINKEGNLVLLNASQSVLWSTNATKKASTPIVQLLDNGNLVIRDEDSERNEENFCWQSFDHPSDTLLPEMKIGWDKKTGIQTIFTAWKNWEDPSLGDFTSLMSRSNNPEVVLMKGSTEFHRTGPMTGTTDSGAYGLKANPIFISDVVSSEDEAYFSYTLKNKTLISIVVLNQTLLLLQRLVWIPESRKWSNYMNLPHDTCDSYNVCGAYGNCDINGSPLCQCLDGFKPKSPQQWNTMDWSDGCVHTGNWSCGVKGRDGFLKVTGGKLPDTTNTWVNANMTLDDCKLKCLQNCSCTAYSSLGPDDDSGGCSLWFKDLKDLRVSDSQRNFYVRIDASDIGDKREYTKMIILLVSIVVVAFIVIILALYFYREKIKHKGNNEGDHDDLDLPFFDLATIHEATNYFSNYNKLGEGGFGPVYKGKLKDGQEVAVKKLSRSSSQGLKEFKNEVILCSKLQHRNLVKIIGFCVTKDEKMLVYEYMSNTSLDSFIFDPIQSKLLDWPLRFNILYGIARGLLYLHQDSRLRIVHRDLKASNVLLDNDMQPKISDFGLAKMCGGDKVEGETSRIVGTYGYMAPEYAIDGVFSVKSDVFSFGVLLLELISGKKNRTLTYNQDDHNLIGHAWKLWKEDSIQSLIDDNLKDTCILHEALRCIQIGLLCLQHHPDNRPNMTSVVVMLSSNNILPEPHEPGYLLQNITSEGEPSSTERQSSSSINNVTISLLNAR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00684 820 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 20 764 - -
Vivi2g00684 820 ProSiteProfiles PAN/Apple domain profile. 351 433 IPR003609 -
Vivi2g00684 820 PIRSF SRK 6 820 IPR024171 GO:0004674
Vivi2g00684 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 30 159 - -
Vivi2g00684 820 Pfam D-mannose binding lectin 82 188 IPR001480 -
Vivi2g00684 820 MobiDBLite consensus disorder prediction 792 820 - -
Vivi2g00684 820 Pfam S-locus glycoprotein domain 221 330 IPR000858 GO:0048544
Vivi2g00684 820 ProSiteProfiles Protein kinase domain profile. 502 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00684 820 ProSiteProfiles EGF-like domain profile. 296 332 IPR000742 -
Vivi2g00684 820 Gene3D Hepatocyte Growth Factor 350 430 - -
Vivi2g00684 820 CDD B_lectin 40 162 IPR001480 -
Vivi2g00684 820 CDD PAN_AP_plant 350 432 - -
Vivi2g00684 820 SMART serkin_6 502 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00684 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 193 IPR036426 -
Vivi2g00684 820 SUPERFAMILY Protein kinase-like (PK-like) 486 799 IPR011009 -
Vivi2g00684 820 Pfam PAN-like domain 351 418 IPR003609 -
Vivi2g00684 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 577 - -
Vivi2g00684 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 781 - -
Vivi2g00684 820 SMART blect_4 40 162 IPR001480 -
Vivi2g00684 820 SMART ntp_6 354 432 IPR003609 -
Vivi2g00684 820 CDD STKc_IRAK 508 773 - -
Vivi2g00684 820 ProSiteProfiles Bulb-type lectin domain profile. 34 155 IPR001480 -
Vivi2g00684 820 MobiDBLite consensus disorder prediction 787 820 - -
Vivi2g00684 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Vivi2g00684 820 Gene3D Phosphorylase Kinase; domain 1 467 577 - -
Vivi2g00684 820 Gene3D - 29 159 IPR036426 -
Vivi2g00684 820 Pfam Protein tyrosine and serine/threonine kinase 505 772 IPR001245 GO:0004672|GO:0006468
Vivi2g00684 820 Gene3D Transferase(Phosphotransferase) domain 1 578 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00684 Vivi-Chr2 18978820 18982578 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00684 448 791 Receptor kinase-like Gene Family AT4G23230 51.852 1.55e-122 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g00684 PK_Tyr_Ser-Thr 9.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00684 - - tpra:123915292 1075.85