Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00683 ATGGTTACCAAGAAAAACTGCAAAATGTCAACCTTTCCTTCTTCTCTGTTTCTTATCACTAACCTCCTATTATTATTCTTGTTCAAATTTTCCTCCGCAGCAGATACTATAACCCAATCAGAGTCACTTTCTGATGGTAAGACATTGATTTCAAAAGATGGAACCTTCGAGTTGGGTTTCTTCAATCCCGGTAGTTCCTCAAACCGCTACGTCGGAATGTGGTACAAAAACATACCGGTTAAAACCGTTGTTTGGGTTGCAAACCGTGATAATCCTATCAAGGACAACTCGAGCAAGTTGATCATAAACAAAGAAGGAAATCTCGTTCTTCTCAACGCCAGTCAGTCTGTTCTATGGTCAACAAACGCAACAAAGAAGGCTTCCACCCCAATCGTCCAGCTTCTGGACAACGGAAATTTAGTGATCAGAGATGAGGACAGCGAAAGAAATGAAGAGAATTTTTGTTGGCAAAGCTTTGACCATCCTAGTGACACGTTGTTACCAGAAATGAAGATCGGATGGGACAAGAAAACCGGTATTCAAACAATATTTACTGCATGGAAAAACTGGGAAGATCCATCTTTAGGTGATTTTACATCACTGATGAGCCGTAGTAATAATCCTGAAGTGGTTCTTATGAAAGGCTCAACGGAGTTCCACAGAACGGGACCGATGACCGGTACTACGGATAGTGGAGCATATGGATTGAAGGCTAACCCAATTTTTATTTCAGATGTTGTAAGCAGCGAAGACGAAGCCTATTTTTCGTACACGCTAAAGAACAAAACTCTGATTTCCATAGTTGTTTTAAACCAAACGCTTTTACTTCTTCAACGCCTTGTATGGATACCTGAATCTCGAAAATGGAGTAATTACATGAACCTACCACATGATACCTGTGATTCTTATAACGTTTGTGGAGCGTATGGAAATTGTGACATCAACGGATCGCCACTTTGTCAGTGTTTGGATGGTTTTAAGCCGAAATCGCCGCAACAGTGGAACACGATGGACTGGTCAGATGGATGTGTGCACACTGGAAATTGGAGCTGTGGAGTCAAGGGTAGAGACGGTTTCCTTAAGGTTACTGGAGGGAAGTTGCCGGATACTACGAATACTTGGGTTAATGCAAATATGACACTTGATGATTGCAAGCTCAAATGTCTGCAAAACTGTTCCTGCACAGCTTACTCAAGTTTAGGCCCAGATGACGATTCCGGAGGTTGTTCCCTATGGTTTAAAGATCTTAAAGATTTGAGAGTTTCAGATTCTCAGAGAAACTTCTATGTGCGTATTGATGCATCAGATATAGGTGATAAACGTGAGTATACAAAAATGATTATCTTGCTAGTTTCAATCGTTGTTGTTGCTTTCATTGTGATCATATTGGCACTATACTTTTATCGAGAGAAGATAAAACACAAAGTAGGCAATAATGAAGGTGACCATGACGATTTAGACCTCCCTTTCTTTGATCTTGCTACAATACATGAAGCCACGAATTACTTCTCAAATTATAATAAATTGGGTGAAGGTGGTTTTGGACCCGTATACAAGGGTAAGTTGAAAGACGGTCAAGAAGTTGCTGTCAAAAAACTTTCAAGAAGTTCTAGCCAAGGATTGAAAGAATTTAAGAACGAAGTTATTTTATGTTCTAAACTTCAACATCGAAACCTTGTTAAAATAATTGGTTTTTGCGTTACAAAAGATGAAAAAATGTTGGTCTATGAGTATATGTCGAACACAAGCCTTGATTCATTTATTTTTGATCCAATTCAAAGCAAATTATTAGATTGGCCTTTGCGTTTCAACATCTTGTATGGAATTGCCCGAGGTCTTCTTTACTTGCATCAAGATTCAAGGTTAAGAATTGTTCACAGAGATTTGAAAGCGAGCAATGTTTTATTAGACAATGATATGCAACCAAAAATTTCGGATTTTGGTCTAGCTAAAATGTGTGGAGGTGACAAAGTGGAGGGTGAAACAAGTCGAATAGTCGGCACATACGGTTACATGGCGCCAGAATATGCCATTGACGGAGTATTCTCAGTTAAATCAGATGTATTTAGCTTTGGTGTCTTATTGCTAGAACTTATAAGTGGAAAGAAAAACAGAACCCTTACCTACAACCAAGATGATCACAATCTTATTGGACATGCATGGAAATTATGGAAAGAGGACAGCATACAGTCATTGATTGATGATAATTTGAAAGATACGTGCATTCTTCATGAAGCTTTGCGATGTATTCAAATAGGGCTTTTGTGTCTGCAACATCATCCTGATAATAGGCCAAATATGACATCTGTTGTTGTGATGTTGAGTAGTAATAATATTTTACCTGAACCACACGAACCAGGTTATTTATTACAAAATATAACAAGCGAAGGAGAACCTTCTTCTACCGAAAGACAAAGTTCTTCTTCAATAAATAATGTAACTATCTCACTACTAAATGCAAGATAG 2466 0.3844 MVTKKNCKMSTFPSSLFLITNLLLLFLFKFSSAADTITQSESLSDGKTLISKDGTFELGFFNPGSSSNRYVGMWYKNIPVKTVVWVANRDNPIKDNSSKLIINKEGNLVLLNASQSVLWSTNATKKASTPIVQLLDNGNLVIRDEDSERNEENFCWQSFDHPSDTLLPEMKIGWDKKTGIQTIFTAWKNWEDPSLGDFTSLMSRSNNPEVVLMKGSTEFHRTGPMTGTTDSGAYGLKANPIFISDVVSSEDEAYFSYTLKNKTLISIVVLNQTLLLLQRLVWIPESRKWSNYMNLPHDTCDSYNVCGAYGNCDINGSPLCQCLDGFKPKSPQQWNTMDWSDGCVHTGNWSCGVKGRDGFLKVTGGKLPDTTNTWVNANMTLDDCKLKCLQNCSCTAYSSLGPDDDSGGCSLWFKDLKDLRVSDSQRNFYVRIDASDIGDKREYTKMIILLVSIVVVAFIVIILALYFYREKIKHKVGNNEGDHDDLDLPFFDLATIHEATNYFSNYNKLGEGGFGPVYKGKLKDGQEVAVKKLSRSSSQGLKEFKNEVILCSKLQHRNLVKIIGFCVTKDEKMLVYEYMSNTSLDSFIFDPIQSKLLDWPLRFNILYGIARGLLYLHQDSRLRIVHRDLKASNVLLDNDMQPKISDFGLAKMCGGDKVEGETSRIVGTYGYMAPEYAIDGVFSVKSDVFSFGVLLLELISGKKNRTLTYNQDDHNLIGHAWKLWKEDSIQSLIDDNLKDTCILHEALRCIQIGLLCLQHHPDNRPNMTSVVVMLSSNNILPEPHEPGYLLQNITSEGEPSSTERQSSSSINNVTISLLNAR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00683 821 PIRSF SRK 6 821 IPR024171 GO:0004674
Vivi2g00683 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 578 - -
Vivi2g00683 821 ProSiteProfiles PAN/Apple domain profile. 351 433 IPR003609 -
Vivi2g00683 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 782 - -
Vivi2g00683 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 30 159 - -
Vivi2g00683 821 SUPERFAMILY Protein kinase-like (PK-like) 487 800 IPR011009 -
Vivi2g00683 821 Pfam Protein tyrosine and serine/threonine kinase 506 773 IPR001245 GO:0004672|GO:0006468
Vivi2g00683 821 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 20 765 - -
Vivi2g00683 821 Pfam D-mannose binding lectin 82 188 IPR001480 -
Vivi2g00683 821 ProSiteProfiles EGF-like domain profile. 296 332 IPR000742 -
Vivi2g00683 821 Gene3D Hepatocyte Growth Factor 350 430 - -
Vivi2g00683 821 CDD B_lectin 40 162 IPR001480 -
Vivi2g00683 821 CDD PAN_AP_plant 350 432 - -
Vivi2g00683 821 CDD STKc_IRAK 509 774 - -
Vivi2g00683 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 193 IPR036426 -
Vivi2g00683 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Vivi2g00683 821 Gene3D Transferase(Phosphotransferase) domain 1 579 781 - -
Vivi2g00683 821 Pfam S-locus glycoprotein domain 221 330 IPR000858 GO:0048544
Vivi2g00683 821 Pfam PAN-like domain 351 418 IPR003609 -
Vivi2g00683 821 MobiDBLite consensus disorder prediction 793 821 - -
Vivi2g00683 821 SMART blect_4 40 162 IPR001480 -
Vivi2g00683 821 SMART ntp_6 354 432 IPR003609 -
Vivi2g00683 821 ProSiteProfiles Bulb-type lectin domain profile. 34 155 IPR001480 -
Vivi2g00683 821 ProSiteProfiles Protein kinase domain profile. 503 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00683 821 Gene3D - 29 159 IPR036426 -
Vivi2g00683 821 SMART serkin_6 503 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00683 821 MobiDBLite consensus disorder prediction 788 821 - -
Vivi2g00683 821 Gene3D Phosphorylase Kinase; domain 1 469 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00683 Vivi-Chr2 18978818 18982580 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00683 448 792 Receptor kinase-like Gene Family AT4G23230 52.137 7.92e-122 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g00683 PK_Tyr_Ser-Thr 9.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00683 - - tpra:123915292 1072.38