Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00680 ATGGAACTGGAGAATAAAAACCAAGTCCAAGTTTCAAATGCAGACCAACAAAATGGAGGAACCAATTTTTTCAAAACATGTTTCAATGTACTCAATACCTTAATAGGCATTGGAATACTGTCAATGCCGTATGCAGTTTATCAAGGAGGATGGTTGAGTTTTTTGCTGCTGATTATATTTGGGATGATATGTTGCTACACAGCTTTACTTTTGGATAGGTGTATGAATGCAAATCCAGGAATTAAATCCTATGGTGATTTAGGTGAGGCTGCATTTGGATACAAAGGAAGAGCTACATTAGCTATATTCATATACATAGAGTTGTTTTTAGTAGCTGTGGAGCTTCTTATATTAGAAGGTGACAATTTGGAGAAGCTTTATCCAAATATGATATTCACAATCTTTGGACTTAGAATTGGTGGTAAAAGTGGTTTTGTTATTCTCACTGCCTTTGCAATATTACCAACAACATGGTTGAGAAACTATGGAGTTCTAGCCTATGTTTCTATTGGTGGGGTGTTTACTTGTGTTATTTTGATTGGATGTGTTGTGTGGGTGGGTGAAGTTGATGGTGTAGGGTTTCATCAAAGAGGTGTGTTGCTAAATTTGGGAGGTTTGTCTACTTCTATGAGCCTTTTTGCATTTTGTTACAATGCTCATGCATTAATCCCCACAATACGCAATTCCATGACCGACACAAAACTATTTTCCAAGGTTTTGGTTGTTTGCTTTGGTGCAAGCGCAATAATTTACGGAACTATTGCGGTTTTAGGCTACATGATGTTTGGAGATAAATTAAAGTCTCAAATCACATTAAATTTACCAACTAACACTATAAGCACAAAAATAGCAATCTATTCCACCATAATTAACCCTTTCACTAAGTATGCTATTATAATAAGTCCAATAACAATTGCTATTGAGGAAAAATGGCATGTATGCATGACAAGGCCTATTAGCATTGTAGTTAGAACATCTATTGTTGCTAGCAGTGTACTTGTGGCATTATACATTCCCTTTTTTGCATACATCATGGCATTTATGGGTGCATTCTTGAGTGTTGCAATCTCCTTATTGTTCCCTTGTCTTTGCTACCTAAAGATAAACAAAGGTGCTAAGAGATTTGGGTTAGAGATGATGATCATCATGGGAATTCTTATCATTGGTACATTGATTGGAATCTTTGGTACATACATCTCAGTTCAGAAAATAGTTAATCAGATGAAACATTAA 1233 0.356 MELENKNQVQVSNADQQNGGTNFFKTCFNVLNTLIGIGILSMPYAVYQGGWLSFLLLIIFGMICCYTALLLDRCMNANPGIKSYGDLGEAAFGYKGRATLAIFIYIELFLVAVELLILEGDNLEKLYPNMIFTIFGLRIGGKSGFVILTAFAILPTTWLRNYGVLAYVSIGGVFTCVILIGCVVWVGEVDGVGFHQRGVLLNLGGLSTSMSLFAFCYNAHALIPTIRNSMTDTKLFSKVLVVCFGASAIIYGTIAVLGYMMFGDKLKSQITLNLPTNTISTKIAIYSTIINPFTKYAIIISPITIAIEEKWHVCMTRPISIVVRTSIVASSVLVALYIPFFAYIMAFMGAFLSVAISLLFPCLCYLKINKGAKRFGLEMMIIMGILIIGTLIGIFGTYISVQKIVNQMKH 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00680 410 PANTHER AMINO ACID TRANSPORTER 13 390 - -
Vivi2g00680 410 Pfam Transmembrane amino acid transporter protein 21 401 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00680 Vivi-Chr2 18857504 18859199 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00680 4 408 Amino Acid or Auxin Permease AAAP Family AT3G28960 44.226 1.83e-128 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00680 K15015 - gmx:100812006 544.273