Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00669 ATGGTTACCAAGAAAAACTGCAAAATGTCAACCTTTCCTTCTTCTCTGTTTCTTATCACTAACCTCCTATTATTATTCTTGTTCAAATTTTCCTCCGCAGCAGATACTATAACCCAATCAGAGTCTCTTTCTGATGGTAAGACATTGATTTCAAAAGATGGAACCTTCGAGTTGGGTTTCTTCAATCCCGGTAGTTCCTCAAACCGCTACGTCGGAATGTGGTACAAAAACATACCGGTTAAAACCGTTGTTTGGGTTGCAAACCGTGATAATCCTATCAAGGACAACTCAAGCAAGTTGGTCATAAACAAACAAGGAAATCTCGTTCTTCTCAACGCCAGTCAGTCTGTTCTATGGTCAACAAACGCAACAAAGAAGGCTTCTACTCCAATCGTCCAGCTTCTGGACAACGGAAATTTGGTGATTAGAGATGAGAAGGACAGCGAACGAAATGAAGAGAATTTTTGTTGGCAAAGTTTTGATCATCCTAGTGATACGTTGTTACCAGAAATGAAGATCGGATGGGACAAGAAAACCGGTATTCAAAGAATATTTACTGCATGGAAAAACTGGGAAGATCCATCTTTAGGTGATTTTACATCGTTGATGAGCCGTAGTAATAATCCTGAAGTCGTTCTTATGAAAGGCTCAACGGAGTTCCACAGAACGGGACCGATGACGGGTACTACGGATAGTGGAGCATATGGGTTGAAGGCTAACCCAATTTTTATTTCAGATGTTGTAAGCAGCGAAGACGAAGCCTATTTTTCGTACACGCTAAAGAACAAAACTCTGATTTCCATAGTTGTTTTAAACCAAACGCTTTTACTTCTTCAACGCCTTGTATGGATACCTGAATCTCGAAAATGGAGTAATTACATGAACCTACCACATGATACCTGTGATTCTTATAACGTTTGTGGAGCGTATGGAAATTGTGACATCAACGGATCGCCACTTTGTCAGTGTTTGGATGGTTTTAAGCCGAAATCGCCGCAACAGTGGAACACGATGGACTGGTCAGATGGATGTGTGCACACAGGAAATTGGAGCTGTGGAGTCAAGGGTAGAGACGGTTTCCTTAAGGTTACTGGAGGGAAGTTGCCGGATACTACGTATACTTGGGTTAATGCTAATATGACACTTGATGATTGCAAGCTCAAATGTATGCAAAACTGTTCCTGCACAGCTTACTCAAGCTTAGGCCCAGATGACGATTCCGGCGGTTGTTCCCTATGGTTTAAAGATCTTAAAGATTTGAGAGTTTCAGATTCTCAGAGAAACTTCTATGTGCGTATTGATGCATCAGATATAGGTGATAAACGTGAGTATACAAAAATGATTATCTTGCTAGTTTCCATCGTTGTTGTTGCTTTCATTGTGATCATATTGGCACTATACTTTTATCGAGAGAAGATAAAACACAAAGTAGGCAATAATGAAGGCGATCATGACGATTTAGACCTCCCTTTCTTTGATCTTGCTACTATACATGAGGCCACGAATTACTTCTCAAATTATAACAAATTGGGTGAAGGTGGTTTTGGACCCGTATACAAGGGTAAGTTGAAAGACGGTCAAGAAGTTGCTGTTAAAAAACTTTCAAGAAGTTCTAGCCAAGGATTGAAAGAATTTAAGAATGAAGTTATTTTATGTTCTAAACTTCAACATCGAAACCTTGTTAAAATAATTGGTTTTTGCGTTACAAAAGATGAAAAAATGTTGGTATATGAATATATGTCGAACACAAGCCTTGATTCATTTATTTTTGATCCAATTCAAAGCAAATTATTAGATTGGCCTTTGCGTTTCAACATCTTGTATGGAATTGCCCGAGGTCTTCTTTACTTGCATCAAGATTCAAGGTTAAGAATTGTTCACAGAGATTTGAAAGCGAGCAATGTTTTATTAGACAATGATATGCAACCAAAAATTTCGGATTTTGGTCTAGCTAAAATGTGTGGAGGTGACAAAGTGGAGGGTGAAACAAGTCGAATAGTCGGCACATACGGTTATATGGCGCCAGAATATGCCATTGACGGAGTATTCTCAGTTAAATCAGATGTATTTAGCTTTGGTGTCTTATTGCTAGAACTTATAAGTGGAAAGAAAAACAGAACACTTACCTACAACCAAGACGATCACAATCTTATTGGACATGCATGGAAATTATGGAAAGAGGACAACATACAGTCATTGATTGATGATAACTTGAAAGATACGTGCATTCTTCATGAAGCTTTGCGATGTATTCAAATAGGGCTTTTGTGTCTGCAACATCATCCTGATAATAGGCCAAATATGACATCTGTTGTTGTGATGTTGAGTAGTAATAATATTTTACCTGAACCACACGAACCAGGTTATTTATTACAAAATATAACAAGCGAAGGAGAACCTTCTTCTACCGAAAGACAAAGTTCTTCTTCAATAAATAATGTAACTATCTCACTACTAAATGCAAGATAG 2469 0.3827 MVTKKNCKMSTFPSSLFLITNLLLLFLFKFSSAADTITQSESLSDGKTLISKDGTFELGFFNPGSSSNRYVGMWYKNIPVKTVVWVANRDNPIKDNSSKLVINKQGNLVLLNASQSVLWSTNATKKASTPIVQLLDNGNLVIRDEKDSERNEENFCWQSFDHPSDTLLPEMKIGWDKKTGIQRIFTAWKNWEDPSLGDFTSLMSRSNNPEVVLMKGSTEFHRTGPMTGTTDSGAYGLKANPIFISDVVSSEDEAYFSYTLKNKTLISIVVLNQTLLLLQRLVWIPESRKWSNYMNLPHDTCDSYNVCGAYGNCDINGSPLCQCLDGFKPKSPQQWNTMDWSDGCVHTGNWSCGVKGRDGFLKVTGGKLPDTTYTWVNANMTLDDCKLKCMQNCSCTAYSSLGPDDDSGGCSLWFKDLKDLRVSDSQRNFYVRIDASDIGDKREYTKMIILLVSIVVVAFIVIILALYFYREKIKHKVGNNEGDHDDLDLPFFDLATIHEATNYFSNYNKLGEGGFGPVYKGKLKDGQEVAVKKLSRSSSQGLKEFKNEVILCSKLQHRNLVKIIGFCVTKDEKMLVYEYMSNTSLDSFIFDPIQSKLLDWPLRFNILYGIARGLLYLHQDSRLRIVHRDLKASNVLLDNDMQPKISDFGLAKMCGGDKVEGETSRIVGTYGYMAPEYAIDGVFSVKSDVFSFGVLLLELISGKKNRTLTYNQDDHNLIGHAWKLWKEDNIQSLIDDNLKDTCILHEALRCIQIGLLCLQHHPDNRPNMTSVVVMLSSNNILPEPHEPGYLLQNITSEGEPSSTERQSSSSINNVTISLLNAR 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00669 822 SMART serkin_6 504 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00669 822 SMART blect_4 40 163 IPR001480 -
Vivi2g00669 822 CDD PAN_AP_plant 351 433 - -
Vivi2g00669 822 Gene3D Hepatocyte Growth Factor 351 431 - -
Vivi2g00669 822 CDD B_lectin 40 163 IPR001480 -
Vivi2g00669 822 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 469 579 - -
Vivi2g00669 822 Gene3D - 29 160 IPR036426 -
Vivi2g00669 822 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 20 766 - -
Vivi2g00669 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Vivi2g00669 822 SMART ntp_6 355 433 IPR003609 -
Vivi2g00669 822 SUPERFAMILY Protein kinase-like (PK-like) 488 801 IPR011009 -
Vivi2g00669 822 Gene3D Transferase(Phosphotransferase) domain 1 580 782 - -
Vivi2g00669 822 Gene3D Phosphorylase Kinase; domain 1 470 579 - -
Vivi2g00669 822 Pfam D-mannose binding lectin 82 189 IPR001480 -
Vivi2g00669 822 Pfam S-locus glycoprotein domain 222 331 IPR000858 GO:0048544
Vivi2g00669 822 ProSiteProfiles Protein kinase domain profile. 504 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00669 822 MobiDBLite consensus disorder prediction 794 822 - -
Vivi2g00669 822 PIRSF SRK 6 822 IPR024171 GO:0004674
Vivi2g00669 822 ProSiteProfiles Bulb-type lectin domain profile. 34 155 IPR001480 -
Vivi2g00669 822 ProSiteProfiles PAN/Apple domain profile. 352 434 IPR003609 -
Vivi2g00669 822 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 194 IPR036426 -
Vivi2g00669 822 MobiDBLite consensus disorder prediction 789 822 - -
Vivi2g00669 822 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 580 783 - -
Vivi2g00669 822 Pfam Protein tyrosine and serine/threonine kinase 507 774 IPR001245 GO:0004672|GO:0006468
Vivi2g00669 822 ProSiteProfiles EGF-like domain profile. 297 333 IPR000742 -
Vivi2g00669 822 Pfam PAN-like domain 352 419 IPR003609 -
Vivi2g00669 822 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 30 160 - -
Vivi2g00669 822 CDD STKc_IRAK 510 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00669 Vivi-Chr2 18376909 18380644 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00669 449 793 Receptor kinase-like Gene Family AT4G23230 52.137 1.07e-121 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g00669 PK_Tyr_Ser-Thr 8.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00669 - - tpra:123915292 1073.92