Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00668 ATGGAACTGGAGAGTAAAAACCAAGTCCAAGTTTCAAATACAGACCAACAAAATGGAGGAACCAATTTTTTCAAAGCATGTTTCAATGTACTCAATACCTTAATAGGTATTGGAATACTGTCAATGCCATATGCAGTTTATCAAGGAGGATGGTTGAGTTTTTTGCTGCTGATTATATTTGGGATGATCTGTTGCTACACAGCTTTACTTATGGATCGGTGTATGAATGCAAATCCAGGAATTAAATCCTATGGTGATTTAGGTGAGGCTGCATTTGGATACAAAGGAAGAGCTACATTAGCTATATTCATATACATAGAGTTGTTTTTAGTTGCTGTGGAGCTTCTTATATTAGAAGGTGACAATTTGGAGAAGCTTTATCCAAATATGATATTCACAATCTTTGGACTTAGAATTGGTGGTAAAAGTGGTTTTGTTATTCTCACTGCCTTTGCAATATTACCAACAACATGGTTGAGAAATTATGGAGTTCTAGCATATGTTTCTATTGGTGGGGTGTTTACTTGTGTTATTTTGATTGGATGTGTTGTGTGGGTGGGTGAAGCTGATGGTGTAGGGTTTCATCAAAGAGGTGTGTTGCTAAATTTGGGAGGTTTGTCTACTTCAATGAGCCTTTTTGCATTCTGTTACAATGCTCATGCATTAATCCCCACAATACGTAATTCCATGACTGACACAAAACTATTTTCAAAGGTTTTGGTTGTTTGCTTTGGTGCAAGCGCTATTATATATGGAACTATTGCGGTTTTAGGCTACATGATGTTTGGAGATAAATTAAAGTCTCAAATCACATTAAATTTACCAACTAACACTATAAGCACAAAAATAGCAATCTATTCCACCATAATTAACCCTTTCACTAAGTATGCTATTATAATCAGTCCAATAACAATTGCTATTGAGGAAAAATGGCATGTATGCATGAGAAGACCTATTAGCATTGTAGTTAGAACATCTATTGTTGCTAGCAGTGTACTTGTGGCATTATACATTCCCTTTTTTGCATACATCATGGCATTTATGGGTGCATTCTTGAGTGTTGCAATCTCCTTGTTGTTCCCTTGTCTTTGCTACCTAAAGATAAACAAAGGTGCTAAGAGATTTGGGTTAGAGATGATGATCATCATGGGAATTCTTATCATTGGTACATTGATTGGAATCTTTGGTACATACATCTCAGTTGAGAAAATAGTTAATCAGATGAAGCATTAA 1233 0.3552 MELESKNQVQVSNTDQQNGGTNFFKACFNVLNTLIGIGILSMPYAVYQGGWLSFLLLIIFGMICCYTALLMDRCMNANPGIKSYGDLGEAAFGYKGRATLAIFIYIELFLVAVELLILEGDNLEKLYPNMIFTIFGLRIGGKSGFVILTAFAILPTTWLRNYGVLAYVSIGGVFTCVILIGCVVWVGEADGVGFHQRGVLLNLGGLSTSMSLFAFCYNAHALIPTIRNSMTDTKLFSKVLVVCFGASAIIYGTIAVLGYMMFGDKLKSQITLNLPTNTISTKIAIYSTIINPFTKYAIIISPITIAIEEKWHVCMRRPISIVVRTSIVASSVLVALYIPFFAYIMAFMGAFLSVAISLLFPCLCYLKINKGAKRFGLEMMIIMGILIIGTLIGIFGTYISVEKIVNQMKH 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00668 410 Pfam Transmembrane amino acid transporter protein 21 400 IPR013057 -
Vivi2g00668 410 PANTHER AMINO ACID TRANSPORTER 12 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00668 Vivi-Chr2 18355283 18356796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00668 4 408 Amino Acid or Auxin Permease AAAP Family AT3G28960 44.118 4.11e-127 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00668 K15015 - gmx:100812006 543.117