LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi2g00667	ATGGAATTGGAGAGTGAAAACCAAGTCCATGTTTCAAATGCAAACCAACAAAATGGAGGAACCAATTTTTTCAAAACTTGTTTCAATGTACTTAATACCTTAATAGGTATTGGAATACTGTCAACGTCATATGCAGTTTATCAAGGAGGATGGTTGAGTTTTTTGCTGCTGATTATGTTTGGGATGATATGTTGCTACACAGCTTTACTTTTGGATAGGTGTATGAATGCAAATCCAGAAATTAAATCCTATGCTGATTTAGGTGAGGTTACCTTTGGCTACAAAGGAAGAGCAGTGATCGGTATTTTCATATATTTAGAGGCATTTTTAATTTGTGTGGAGCTTCTTATTCTAGAAGCAGACAATTTGGAGAAGCTTTTCCCAAACATGAGATTCACAGTGTTTGGCCTAAGAATTGGTGGGAAAAGTGGTTTTGTTTTTCTCACTGCTTTGGCAATACTACCAACAACATGGTTGAGAAATTTGGGAGCTTTGGCCTATATTTCTGTTGGTGGAGTGCTTACTTCTGTTATTTTAATTGCTTGTGTTATGTGGGTTGGTGAAGTGGATGGTGTGGGATTTCATGAAAGAGGTCATGTCATACATTGGACTGGATTGTCTACTTCTATGAGCATTTTTGCTTTTTGTTTTAGTGCTCATTCCTTGATGCCTACAATATGCACTTCCATGAGGGACAGAAAACAATTTTCCAAGGTTATGTTTTGGACAAATTGGTGTAATTCTTGGCTGGTTTTGAAGCTGACTTTGGACAGACATGTAGCATTGTATTGTGCAGCAGGGATTTTGGAGTGTAGCATTTGTTTTGCAGGAAAGATGATGGTGATAGTGCATAGTCACGTGAAGGCAAGGAGCAAGAATGTTTGTCAATTTTTTTTGTTTTTGTTTAGTATACAAAAAATGTAA	924	0.369	MELESENQVHVSNANQQNGGTNFFKTCFNVLNTLIGIGILSTSYAVYQGGWLSFLLLIMFGMICCYTALLLDRCMNANPEIKSYADLGEVTFGYKGRAVIGIFIYLEAFLICVELLILEADNLEKLFPNMRFTVFGLRIGGKSGFVFLTALAILPTTWLRNLGALAYISVGGVLTSVILIACVMWVGEVDGVGFHERGHVIHWTGLSTSMSIFAFCFSAHSLMPTICTSMRDRKQFSKVMFWTNWCNSWLVLKLTLDRHVALYCAAGILECSICFAGKMMVIVHSHVKARSKNVCQFFLFLFSIQKM	307

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi2g00667	307	Pfam	Transmembrane amino acid transporter protein	21	246	IPR013057	-
	Vivi2g00667	307	PANTHER	AMINO ACID TRANSPORTER	13	241	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi2g00667	Vivi-Chr2	18318165	18330287	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi2g00667	3	240	Amino Acid or Auxin Permease AAAP Family	AT3G28960	44.118	2.49e-73	229

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi2g00667	K15015		-	gmx:100812006	327.405