Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00647 ATGTCCAGACCTGATGCAGTGGATATGATGGTGACCTATTTGGGAGCTGGCCTAAAGGATTCCCTAAAGGAGCTTGAAGACAATAAAGGGTATCATGCTAGATTTGTGTTATTGGAGAAGCTGTATATACACCATCCGACTACGACAGTGAAGGTCGATGGTGATGATGCACATATTCTGCATCATAGAGCACGTGCATTAAGATCATACCTCATGTACTTAGTTAGACCGTTCATATTTTTGGACAATAGTGCTTATTACATCGATGTGGTTTGCCTAGATGCTTCTTATACTTCAAGTGGATTCATGATTACAACTGATGGGTCGCTAGTTTGGCATGGATTCTCCAATAGTTTTCACGCATCTCAGGCTGGTCATATGTTGATGACTACACGGAGGATCAACCAATTTTCACTTTGTTATTCTATGGACTCTTTAATCATAGTTTTCACTATGGTCTATGGACTCTTTAATCCTGCATGCTCAATTTCCTTCAACTTCTCAAACTTTCAACCAAACTTATATCTAATAAACTTCCAAGGTGATGCATTTTCCTCCAACAATGTTCTCCAGCTAACCAAAAACCAGCTTGATGGCCCTATCACAAGCAGCGCCGGCCGCGCTTCATTCGACCAACCGGTGAAGCTTTACGATAAACAAACTCATGAGCTCACTGACTTCACAACACATTTCACCTTTATTATGAGAGCTGTTGTCGCGACGCAGTTTGGCGATGGTTTATCGTTCTTCATCGCTCCGTTTCAGTCTGACATCCCGAAGAATTCGTCTGGTGGTTACCTTGGCTTGTTCAACAATGAAACTGCATTTGATACTGATAAAAACCAAATAGTAGCTGTTGAGTTTGATAGTTTTATGAATGATTGGGACCCGAGTTCGGATCACGTTGGAATCAACGTAAATTCGATTCAATCGGTTCAAAATGTTACTTGGAGAAGAAACATTAAAAACGGCTCGGTCGCGAATGCTTGGATATCGTATAACTCTACCACAAAAAACCTTTCTGTTTTTCTTACTTATGCTAATAATCCAACTTTTCATGGAAACTCTAGTCTCTCACATGTTATAGATTTGAGAGATTTTTTGCCTGAATATGTTAGGATTGGTTTCTCAGCTGCTACAGGTCAGTGGATTGAAATACACAACATTCTATCTTGGTCATTCAACTCAAATTTGGAAAGTGGCAATGGTAGAAACATCAAGGTAGGGTTAGGAGTTGGTTTAAGTGTTGGTTTTTGTTCTTTATCTTGTTTTGTATGTGTTTTATGGTTCACTCTTTGGAGAAAAAGAAGAGGAGTACTAAACAAAGGTAAAAGGGACAATAACATTACAGGTTTGGATTACTCGATAGATGACGACGAATTCGAGAGAGGAACCGGTCCGAAAAAGTTCACTTACAAGCAACTAAGCAATGCCACAAATGGTTTTGATGAAAAAGGAAAGCTTGGAGAAGGTGGATTTGGAGGTGTTTACAAAGGTTTACTTTCAAAGGAAACAAGAATGGAAGTAGCTGTGAAAAGGGTTTCAAAAGGGTCAAGACAAGGGAAGAAAGAATACATATCAGAAGTGAGGATAATAAGCAAACTAAGACATAGAAACTTGGTTCAACTCTTAGGTTGGTGTCATGAAAAAAATGAACTTTTACTTGTTTATGAGTACATGCCTAATGGAAGTCTTGATTTTCATCTGTTTGGAAAAGGGGTTATGCTAAGTTGGAATATAAGATACAAAATAGCATTAGGTTTGGCTTCATCTCTTCTTTATTTGCATGAAGAGTGGGAACAATGTGTGGTGCATAGAGATATTAAGTCAAGTAATGTAATGTTGGATGCAAATTTTAACTCCAAGCTTGGTGATTTTGGTCTTGCAAGGCTAGTGGATCATGAACTTGGTTCACAAACAACAGTTTTGGCAGGTACAATGGGATATTTAGCACCAGAGTGTGTGACAACAGGGAAGTCTAGTAAGGAATCTGATGTTTATAGCTTTGGAGTTGTTGCACTTGAGATCACATGTGGTAGGAGGCCAGTTGAGGCAAGAGAAGAGGGTAGGAAAGTTAGGCTTGTGGAATGGATTTGGGATTTGTATGGTAAAGGTGAGATGTTTGAAGGGGTTGATAAAGGGTTGAATATGGAGTTTGATGAGAAGCAAATGGAGTGTTTGATGATTGTTGGATTGTGGTGTTGTCATCCTGATTTTACTATGAGGCCTTCTATAAGACAAGTGATTAATGTTTTGAATTTTGAAGGTGCTTTGCCTAGTCTTCCATCAAAGTTGCCTGTGCCTATGTACTTTGCTCCTCCTATGGAGATGTGTAGGTTTTCTTATAATTCTGATGGCCTCACAAACACAACTAGAGGGTCCTCTACTTACTCTTCTTTGTCAGCAGGGTCTAGAAAATCTCTATTGTAG 2430 0.3918 MSRPDAVDMMVTYLGAGLKDSLKELEDNKGYHARFVLLEKLYIHHPTTTVKVDGDDAHILHHRARALRSYLMYLVRPFIFLDNSAYYIDVVCLDASYTSSGFMITTDGSLVWHGFSNSFHASQAGHMLMTTRRINQFSLCYSMDSLIIVFTMVYGLFNPACSISFNFSNFQPNLYLINFQGDAFSSNNVLQLTKNQLDGPITSSAGRASFDQPVKLYDKQTHELTDFTTHFTFIMRAVVATQFGDGLSFFIAPFQSDIPKNSSGGYLGLFNNETAFDTDKNQIVAVEFDSFMNDWDPSSDHVGINVNSIQSVQNVTWRRNIKNGSVANAWISYNSTTKNLSVFLTYANNPTFHGNSSLSHVIDLRDFLPEYVRIGFSAATGQWIEIHNILSWSFNSNLESGNGRNIKVGLGVGLSVGFCSLSCFVCVLWFTLWRKRRGVLNKGKRDNNITGLDYSIDDDEFERGTGPKKFTYKQLSNATNGFDEKGKLGEGGFGGVYKGLLSKETRMEVAVKRVSKGSRQGKKEYISEVRIISKLRHRNLVQLLGWCHEKNELLLVYEYMPNGSLDFHLFGKGVMLSWNIRYKIALGLASSLLYLHEEWEQCVVHRDIKSSNVMLDANFNSKLGDFGLARLVDHELGSQTTVLAGTMGYLAPECVTTGKSSKESDVYSFGVVALEITCGRRPVEAREEGRKVRLVEWIWDLYGKGEMFEGVDKGLNMEFDEKQMECLMIVGLWCCHPDFTMRPSIRQVINVLNFEGALPSLPSKLPVPMYFAPPMEMCRFSYNSDGLTNTTRGSSTYSSLSAGSRKSLL 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00647 809 ProSitePatterns Legume lectins beta-chain signature. 284 290 IPR019825 -
Vivi2g00647 809 Gene3D - 161 408 - -
Vivi2g00647 809 SUPERFAMILY Concanavalin A-like lectins/glucanases 160 400 IPR013320 -
Vivi2g00647 809 Pfam Legume lectin domain 163 400 IPR001220 GO:0030246
Vivi2g00647 809 SUPERFAMILY Protein kinase-like (PK-like) 466 778 IPR011009 -
Vivi2g00647 809 FunFam L-type lectin-domain containing receptor kinase IX.1 161 406 - -
Vivi2g00647 809 FunFam L-type lectin-domain containing receptor kinase IX.1 467 559 - -
Vivi2g00647 809 ProSitePatterns Legume lectins alpha-chain signature. 368 377 IPR000985 -
Vivi2g00647 809 CDD STKc_IRAK 496 753 - -
Vivi2g00647 809 CDD lectin_legume_LecRK_Arcelin_ConA 163 398 IPR001220 GO:0030246
Vivi2g00647 809 Pfam Protein kinase domain 483 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00647 809 PANTHER - 180 754 - -
Vivi2g00647 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 603 615 IPR008271 GO:0004672|GO:0006468
Vivi2g00647 809 SMART serkin_6 482 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00647 809 ProSitePatterns Protein kinases ATP-binding region signature. 488 512 IPR017441 GO:0005524
Vivi2g00647 809 Gene3D Phosphorylase Kinase; domain 1 467 559 - -
Vivi2g00647 809 ProSiteProfiles Protein kinase domain profile. 482 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00647 809 Gene3D Transferase(Phosphotransferase) domain 1 560 772 - -
Vivi2g00647 809 FunFam Lectin-domain containing receptor kinase A4.3 560 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00647 Vivi-Chr2 17619106 17622995 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00647 143 770 Receptor kinase-like Gene Family AT5G10530 51.869 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi2g00647 Pkinase 7.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00647 - - vvo:131648651 1622.83