Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00619 ATGTCAAACCTTTCCAATGGAATAGATTTGAATGAGAACAACGAGAGAAAATCAGAAGCAGAACAAGACTTAGAAGATGAAGAAAGTTTCTCACATGCAATACAACTATGCAGCTCTACTGTGCTACCAATGGCACTTCAATCTGCAACCGAGCTTGGTGTTTTTGATGTGTTGCTAAAAGCCGGTAGAGATGCTCAACTCTCCGCTGACGAGATAGCGTCTCATCTCACATGTACTAATTTAGATGCTCCCAAAATGTTGGATCGGATCCTTGCTCTTCTTGCATCTAATTCTATATTGAAATGTTTTGTTCTTCTAGATGAAGAAAAGCTTGGATCGTTTCGTAGACTTTATAGTATGGCTCCTGTTGCTAGATTCTTTGCTCGTGATTCTGATGGTGTTTCGTTAGGACCCTTATTGTCTTTGATTCAAGATAAAGTCTTCTTAGCTAGTTGGTAA 459 0.3922 MSNLSNGIDLNENNERKSEAEQDLEDEESFSHAIQLCSSTVLPMALQSATELGVFDVLLKAGRDAQLSADEIASHLTCTNLDAPKMLDRILALLASNSILKCFVLLDEEKLGSFRRLYSMAPVARFFARDSDGVSLGPLLSLIQDKVFLASW 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00619 152 PANTHER O-METHYLTRANSFERASE 36 152 IPR016461 GO:0008168
Vivi2g00619 152 FunFam Caffeic acid 3-O-methyltransferase 11 127 - -
Vivi2g00619 152 SUPERFAMILY "Winged helix" DNA-binding domain 25 130 IPR036390 -
Vivi2g00619 152 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 34 152 IPR016461 GO:0008168
Vivi2g00619 152 Coils Coil 10 30 - -
Vivi2g00619 152 Gene3D - 9 127 IPR036388 -
Vivi2g00619 152 Pfam Dimerisation domain 44 95 IPR012967 GO:0046983
Vivi2g00619 152 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00619 Vivi-Chr2 16577843 16578301 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00619 18 152 Monolignol Biosynthesis Gene Families AT1G77520 40.714 6.91e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00619 K13066 - gmx:100803633 177.948