Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00618 ATGTCAAACATTTCCAATGAAATAGATTTGAATGAGAACAAAGAGAGAAAATCAGAAGCAGAACAAGACTTAGAAGATGAAGAAAGTTTCTCACATGCAATACAACTATGCAGTTCTACTGTGCTACCAATGGCTCTTCAATCTGCAACCGAGCTTGGTGTTCTCGACGTGTTGCTAAAAGCTGGTAACGATGCTCAACTCTCCGCTGACGAGATAGCGTCTCGTCTCTCATGTACTAATCTAGATGCTCCCAAAATGTTGGATCGGATCCTTGCTCTTCTTGCATCTAATTCTATATTGAAATGTTTTGTTCTTCAAGATGAAGAAAAGCTTGGATCGTTTCGTAGACTTTATAGTATGGCTCCTGTTGCTAGATTCTTCGCTCGTGATTCTGATGGTGTTTCGTTAGGGCCCTTATTGTCTTTGATTCAGGATAAAGTCTTCTTAGCTAGTTGGTAA 459 0.3987 MSNISNEIDLNENKERKSEAEQDLEDEESFSHAIQLCSSTVLPMALQSATELGVLDVLLKAGNDAQLSADEIASRLSCTNLDAPKMLDRILALLASNSILKCFVLQDEEKLGSFRRLYSMAPVARFFARDSDGVSLGPLLSLIQDKVFLASW 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00618 152 MobiDBLite consensus disorder prediction 9 25 - -
Vivi2g00618 152 SUPERFAMILY "Winged helix" DNA-binding domain 25 130 IPR036390 -
Vivi2g00618 152 Gene3D - 39 152 IPR036388 -
Vivi2g00618 152 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 34 152 IPR016461 GO:0008168
Vivi2g00618 152 Coils Coil 7 30 - -
Vivi2g00618 152 MobiDBLite consensus disorder prediction 1 25 - -
Vivi2g00618 152 FunFam Caffeic acid 3-O-methyltransferase 11 127 - -
Vivi2g00618 152 PANTHER O-METHYLTRANSFERASE 36 152 IPR016461 GO:0008168
Vivi2g00618 152 Pfam Dimerisation domain 44 95 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00618 Vivi-Chr2 16573424 16573882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00618 18 152 Monolignol Biosynthesis Gene Families AT1G77520 41.429 4.62e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00618 K13066 - gmx:100803633 174.866