Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00561 ATGTCAAACCTTTCCAATGGAATAGATTTGAATGAGAACAAAGAGAGAACATCAGAAGCAGAAAAAGAGTTAGAAGATGAAGAAAGTTTCTCACATGCAATACAACTTTGCAGCTCTACTGTGCTACCAATGGCTCTTCAATCTGCAACCGAGCTTGGTGTTTTCGACGTGTTGCTAAAAGCTGATGAAGAAAAGCTTGGATCGTTTAGTAGACTTTATAGTATGGCTCCTGTTGCAAGATTCTTCGCTCGTGATTCCGACGGTGTTTCGTTAGGACCCTTATTGTCTTTGATTCAAGATAAAGTCTTCTTAGCTAGTTGGTCTGAGCTTAAGAATGCGATTCGAGAAGGGGGTGTACCATTCGACAGAGTTTATGGCACACATGCTTTTGATTATCCAAGTTTGGACACGAGGTTTAACCAAGTTTTCAACACAGGTATGATCAATCATACCAAAGTAGTTATGAAGAAGATTCTTGAATGCTACAAAGGTTTTGATAATGTAAAAAAGCTTGTGGATGTTGGAGGTGGTCTTGGGGTCAACATTAACTCAGTCACTTCCAAATACCCTCATATTAAGGGTATTAATTTCGACTTGCCTCATGTCATAGAACATGCTCCTTCTTATCCAGGAGTTGAACATATTGGTGGAGATATGTTTGAAAGTGTGCCTAAAGGAGATGCTATCTTTATGAAGTGGATACTTCATGATTGGAGCGATGAGCATTGCTTAAAGCTTTTGAAGAATTGTTATGATGCTATTCCTGATGATGGAAAGGTGATTGTTTTGGAGGCACTTCTTCCTATTATACCTAAAAATGGATATGGTTCCAAGTGTATCTCTCAATTGGATGTTTTGATGATGACTCTAAATCCAGGTGGAAAAGAACGAAGTAAGCAAGAATTTGAAGATTTGGCAACAAGAGTTGGATTTAGTGGCATCAAATATGAATGTTGTGTTCGTAACTTTTGGATTATGGAGTTTTTTAAATAA 993 0.3787 MSNLSNGIDLNENKERTSEAEKELEDEESFSHAIQLCSSTVLPMALQSATELGVFDVLLKADEEKLGSFSRLYSMAPVARFFARDSDGVSLGPLLSLIQDKVFLASWSELKNAIREGGVPFDRVYGTHAFDYPSLDTRFNQVFNTGMINHTKVVMKKILECYKGFDNVKKLVDVGGGLGVNINSVTSKYPHIKGINFDLPHVIEHAPSYPGVEHIGGDMFESVPKGDAIFMKWILHDWSDEHCLKLLKNCYDAIPDDGKVIVLEALLPIIPKNGYGSKCISQLDVLMMTLNPGGKERSKQEFEDLATRVGFSGIKYECCVRNFWIMEFFK 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00561 330 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 330 IPR016461 GO:0008168
Vivi2g00561 330 SUPERFAMILY "Winged helix" DNA-binding domain 25 84 IPR036390 -
Vivi2g00561 330 Pfam O-methyltransferase domain 107 312 IPR001077 GO:0008171
Vivi2g00561 330 Gene3D Vaccinia Virus protein VP39 83 330 IPR029063 -
Vivi2g00561 330 PIRSF O-mtase 10 72 IPR016461 GO:0008168
Vivi2g00561 330 PIRSF O-mtase 59 330 IPR016461 GO:0008168
Vivi2g00561 330 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 87 328 IPR029063 -
Vivi2g00561 330 Gene3D - 10 79 IPR036388 -
Vivi2g00561 330 PANTHER O-METHYLTRANSFERASE 36 315 IPR016461 GO:0008168
Vivi2g00561 330 MobiDBLite consensus disorder prediction 1 24 - -
Vivi2g00561 330 FunFam Caffeic acid O-methyltransferase 83 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00561 Vivi-Chr2 14510759 14513905 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00561 23 330 Monolignol Biosynthesis Gene Families AT5G54160 47.278 7.64e-118 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00561 K13066 - gmx:100803633 494.582