Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00559 ATGTCAAACCTTTCCAATGGAATAGATTTGAATGAGAACAAAGAGAGAACATCAGAAGCAGAAAAAGAGTTAGAAGATGAAGAAAGTTTCTCACATGCAATACAACTTTGCAGCTCTACTGTGCTACCAATGGCTCTTCAATCTGCAACCGAGCTTGGTGTTTTCGACGTGTTGCTAAAAGCTGGTAACGATGCTCAACTCTCCGCCCATGAGATAGCGTCTCGTCTCACATATGAAGAAAAGCTTGGATCGTTTAGTAGACTTTATAGTATGGCTCCTGTTGCAAGATTCTTCGCTCGTGATTCCGACGGTGTTTCGTTAGGACCCTTATTGTCTTTGATTCAAGATAAAGTCTTCTTAGCTAGTTGGTCTGAGCTTAAGAATGCGATTCGAGAAGGGGGTGTACCATTCGACAGAGTTTATGGCACACATGCTTTTGATTATCCAAGTTTGGACACGAGGTTTAACCAAGTTTTCAACACAGGTATGATCAATCATACCAAAGTAGTTATGAAGAAGATTCTTGAATGCTACAAAGGTTTTGATAATGTAAAAAAGCTTGTGGATGTTGGAGGTGGTCTTGGGGTCAACATTAACTCAGTCACTTCCAAATACCCTCATATTAAGGGTATTAATTTCGACTTGCCTCATGTCATAGAACATGCTCCTTCTTATCCAGGAGTTGAACATATTGGTGGAGATATGTTTGAAAGTGTGCCTAAAGGAGATGCTATCTTTATGAAGTGGATACTTCATGATTGGAGCGATGAGCATTGCTTAAAGCTTTTGAAGAATTGTTATGATGCTATTCCTGATGATGGAAAGGTGGAAAAGAACGAAGTAAGCAAGAATTTGAAGATTTGGCAACAAGAGTTGGATTTAGTGGCATCAAATATGAATGTTGTGTTCGTAACTTTTGGATTATGGAGTTTTTTAAATAAAGAGTGTTGTTGTTGTTGTTATATGAAACTTGATTTCTGCTGGTGTTACTTGTTTGTTATATTACTATAA 1011 0.3808 MSNLSNGIDLNENKERTSEAEKELEDEESFSHAIQLCSSTVLPMALQSATELGVFDVLLKAGNDAQLSAHEIASRLTYEEKLGSFSRLYSMAPVARFFARDSDGVSLGPLLSLIQDKVFLASWSELKNAIREGGVPFDRVYGTHAFDYPSLDTRFNQVFNTGMINHTKVVMKKILECYKGFDNVKKLVDVGGGLGVNINSVTSKYPHIKGINFDLPHVIEHAPSYPGVEHIGGDMFESVPKGDAIFMKWILHDWSDEHCLKLLKNCYDAIPDDGKVEKNEVSKNLKIWQQELDLVASNMNVVFVTFGLWSFLNKECCCCCYMKLDFCWCYLFVILL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00559 336 Gene3D - 10 82 IPR036388 -
Vivi2g00559 336 Gene3D Vaccinia Virus protein VP39 99 307 IPR029063 -
Vivi2g00559 336 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 336 IPR016461 GO:0008168
Vivi2g00559 336 Pfam O-methyltransferase domain 123 276 IPR001077 GO:0008171
Vivi2g00559 336 SUPERFAMILY "Winged helix" DNA-binding domain 25 101 IPR036390 -
Vivi2g00559 336 PANTHER O-METHYLTRANSFERASE 36 281 IPR016461 GO:0008168
Vivi2g00559 336 Pfam Dimerisation domain 44 80 IPR012967 GO:0046983
Vivi2g00559 336 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 103 280 IPR029063 -
Vivi2g00559 336 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00559 Vivi-Chr2 14510681 14513905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00559 23 276 Monolignol Biosynthesis Gene Families AT5G54160 51.246 5.58e-102 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00559 K13066 - gmx:100803633 412.149