Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00558 ATGGCTCCTAGATTCTATTCTCTTACACTCTTCTTCTTGTCCTTAATTTTCTTCACTTTCCCTGTTAATTCAATTCACTTCAAATTTTCCCGTTTTGATCCTAGTGACACCAACTTAGTCTACCAAGGTTCTGCAGCACCAAGTGATAGACTAGTTAACTTTAACATCAATGAATTATATACATGTCAAACCGGAAGAGTCTTCTATTCTGAAAAAGTGTTAATTTGGAACTCAAAAACAGGCCAACTCACTGACTTCACAACTCATTACACCTTTATCATAGACACTCAAAATAGGTCTTCATATGGCCATGGACTTGCCTTTTTCTTGGTTCCTTTTCGTTTCGAAATCCCACTCAATTCTGATGGTGGATTTATGGGCCTATTTAATACAACAACAATGGACTCACCTAGTAATCAAATTGTTCATGTGGAGTTTGATTCTCGCGCAAATGGTGAATGGGGTGAGACAACGGAGCATGTGGGAATCAACAATAATTCGATCATATCATCAACCTCAACATATTGGAATGCGAGCGTGCATAGTGGAGATAATGTTGATGTAACTATTAGCTATAATTCTACAACCAAGAATTTGACTGTATCGTGGAGATATCAAAGTACTTACGATCCTCAAGAAAAAACTAGTCTTTCATATCAAATCGATTTGATGAAGGCTTTGCCCGAATGGGTAACTATAGGATTTTCTGCTGCAACAAGTTATGTTGGAGAAATAAATCATCTTTTGTCATGGGAATTTAACTCCACTCTGGACGACAATGAGGATAGTAATACAGAAGAAACGAGACTAATTGTAATAATAACAATCTCTTGTGGGGTTGCAATAGTAGTGGGAGCATTGGTAGCATATGTAGTAATCAAGAGGAAAAGAAAGATTATTGAAAAGAAAAAAGATGAGGCTATGCATTTAACTTCAATGAATGATGACCTTGAACGAGGAGCAGGGCCGAGAAGGTTCATCTACAAGGAACTTGATATTGCCACCAATAACTTCTCTGTGGATAGAAAGTTGGGCCAAGGTGGTTTTGGAGCTGTTTATAGAGGTTATTTTGCTGATTTAGATTTGCATGTTGCTGTGAAGAAAATATCAAGAGGATCAAAACAAGGTAAGAAAGAGTATGTAACTGAAGTTAAAGTGATTAGCCAACTTCGACATAGGAATCTTGTGAAGTTGTTGGGTTGGTGTCATGACAAAGGTGAGTTTCTTCTTGTTTATGAGTTCATGACTAATGGTAGCCTTGATTATCATTTGTTTGGTAAAAGGATGCCACTTTCTTGGAGTGCAAGGCACAAAATAGCTCTCGGGTTGGCGTCTAGTGTGTTTTATCTACACGAAGAATGGGAGAGGTGTGTGATACATAGAGACATCAAATCAAGTAATGTTATGTTAGATTCTAGTTTCAATGTCAAGCTTGGTGATTTTGGGTTGGCGAAACTAATGGATCATGAGCTTGGGCCTCAGACAACTGGTATAGCCGGAACATTAGGCTATCTAGCTCCAGAGTACGTGAGTACTGGACGGGCCAGCAAAGAGTCAGATGTGTATAGTTTTGGTATAGTTGCTTTGGAGATCACCACTGGAAAGAAAGCTGTTCAAGTTATGAAAGACAAAGATGGAGGAGATAAGGGAATGATTGAGTGGGTTTGGGATCATTATGGAAGAGGAGAGCTACTTATGGCAATGGATGAGAATTTGAGAAAGGATTTTGATGAGAAAGAAGTAGAGTGTTTGATGATTGTTGGATTATGGTGTGCACATCCTGATGTGAATCTAAGACCATCCATTAGACAAGCAATTCAAGTGCTTAATTTTGAGGTTTTGATGCCAAATCTTTCTCCAAAGAGGCCAGTTGCAACCTATCATGCTCCTGCGTTGGATGTAACCTCAGTACAAGCTTCTATCACCACAAGCCTTCAAGATGGTCGTTAA 1950 0.3872 MAPRFYSLTLFFLSLIFFTFPVNSIHFKFSRFDPSDTNLVYQGSAAPSDRLVNFNINELYTCQTGRVFYSEKVLIWNSKTGQLTDFTTHYTFIIDTQNRSSYGHGLAFFLVPFRFEIPLNSDGGFMGLFNTTTMDSPSNQIVHVEFDSRANGEWGETTEHVGINNNSIISSTSTYWNASVHSGDNVDVTISYNSTTKNLTVSWRYQSTYDPQEKTSLSYQIDLMKALPEWVTIGFSAATSYVGEINHLLSWEFNSTLDDNEDSNTEETRLIVIITISCGVAIVVGALVAYVVIKRKRKIIEKKKDEAMHLTSMNDDLERGAGPRRFIYKELDIATNNFSVDRKLGQGGFGAVYRGYFADLDLHVAVKKISRGSKQGKKEYVTEVKVISQLRHRNLVKLLGWCHDKGEFLLVYEFMTNGSLDYHLFGKRMPLSWSARHKIALGLASSVFYLHEEWERCVIHRDIKSSNVMLDSSFNVKLGDFGLAKLMDHELGPQTTGIAGTLGYLAPEYVSTGRASKESDVYSFGIVALEITTGKKAVQVMKDKDGGDKGMIEWVWDHYGRGELLMAMDENLRKDFDEKEVECLMIVGLWCAHPDVNLRPSIRQAIQVLNFEVLMPNLSPKRPVATYHAPALDVTSVQASITTSLQDGR 649
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00558 649 SUPERFAMILY Protein kinase-like (PK-like) 322 622 IPR011009 -
Vivi2g00558 649 Gene3D - 22 281 - -
Vivi2g00558 649 Gene3D Phosphorylase Kinase; domain 1 323 414 - -
Vivi2g00558 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Vivi2g00558 649 FunFam L-type lectin-domain containing receptor kinase IX.1 23 266 - -
Vivi2g00558 649 CDD STKc_IRAK 344 610 - -
Vivi2g00558 649 Gene3D Transferase(Phosphotransferase) domain 1 415 630 - -
Vivi2g00558 649 ProSiteProfiles Protein kinase domain profile. 338 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00558 649 CDD lectin_legume_LecRK_Arcelin_ConA 25 257 IPR001220 GO:0030246
Vivi2g00558 649 SMART serkin_6 338 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00558 649 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 264 IPR013320 -
Vivi2g00558 649 PANTHER - 53 611 - -
Vivi2g00558 649 FunFam Lectin-domain containing receptor kinase A4.3 415 629 - -
Vivi2g00558 649 Pfam Protein kinase domain 339 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00558 649 ProSitePatterns Legume lectins alpha-chain signature. 227 236 IPR000985 -
Vivi2g00558 649 ProSitePatterns Protein kinases ATP-binding region signature. 344 368 IPR017441 GO:0005524
Vivi2g00558 649 Pfam Legume lectin domain 25 267 IPR001220 GO:0030246
Vivi2g00558 649 FunFam L-type lectin-domain containing receptor kinase IX.1 323 414 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi2g00558 Vivi-Chr2 14446481 14448768 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00558 14 628 Receptor kinase-like Gene Family AT5G10530 56.640 0.0 715
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi2g00558 Pkinase 5e-49 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00558 - - qsa:O6P43_033286 835.869