Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00530 ATGTTATCGGAGTTAGTGAACTTTCTGAAGGCCTGCTTTCGGCCGGGTTTGGATGGACATGGACGCACATCGTCGGATTCTGGAGGTAAACAAGATGGATTATTATGGTACAAAGACTCGGGGCAGCACTTATGTGGTGAATTTTCGATGGCTGTAGTGCAAGCCAATAACTTGCTGGAGGATCAGAGTCAGGTTGAATCGGGTAGTTTGAGCTTGAATGAGTCGGGTCCTCATGGAACCTTTGTTGGTGTCTATGATGGGCACGGAGGGCCTGAGACGTCACGGTTTATCAACAAACACCTATTTCAACATCTCAAGAGGTTTACTACTGAGCAACAATCAATGTCGGTGGATGTAATTCGCAAGGCATTCCAAGCAACAGAAGAGGGGTTTATGTCACTAGTTACGCAACTGTGGCCAATTTCACCGCAAATTGCAGCAGTTGGATCATGTTGTCTTGTTGGTGTTATTTGTAACGGAACCCTTTATATAGCAAATCTCGGCGATTCCAGGGCTGTTTTGGGAAGAACGGTTAAAGCAACCGGTGAAGTTTTAGCCATGCAGTTATCAACAGAGCACAATGCATCCATAGAGTCTATAAGACAGGAGCTTCATTCTTTGCACCCTGACGATTCAAATATCGTTGTCTTAAAGCATAACGTATGGCGTGTGAAGGGAATTATTCAAATTTCTAGATGTATTGGCGATGTATATTTGAAGAAAGCCGAGTTCAATAGAGAACCATTATATCCTAAGTTCCGACTTCACGAGCCGTTCAAGAGGCCGATATTGAGCTCAGAACCATCAATATTAGTGCATCAGTTGCAGCCTCAAGATCAATTTATAATATTCGCATCCGATGGGCTCTGGGAACATTTCAGCAACCAAGAAGCAGTTGATATTGTTCAAAACAATCCTCACGCCGGAATTGCGAGGAGGATGGTGAAAACAGCATTGAAAGCGGCTGCAAAGAAGAGAGAAATGAGATATTCAGATTTAAACAAAATAGACCGAGGAGTTCGTCGACATTTCCACGATGATATCACTGTGATAGTTGTATTTCTTGACACAAATATGATGAGTAGGGCAAGCAGTGTGAAGTTCCCTAGTATTTCTGTGAAAGGTGGTGGTGTTAGCCTCCCTCACAACTCATTAGCACCTTGTACTACTACAACAGATAATGGTAGTACTTGA 1194 0.4322 MLSELVNFLKACFRPGLDGHGRTSSDSGGKQDGLLWYKDSGQHLCGEFSMAVVQANNLLEDQSQVESGSLSLNESGPHGTFVGVYDGHGGPETSRFINKHLFQHLKRFTTEQQSMSVDVIRKAFQATEEGFMSLVTQLWPISPQIAAVGSCCLVGVICNGTLYIANLGDSRAVLGRTVKATGEVLAMQLSTEHNASIESIRQELHSLHPDDSNIVVLKHNVWRVKGIIQISRCIGDVYLKKAEFNREPLYPKFRLHEPFKRPILSSEPSILVHQLQPQDQFIIFASDGLWEHFSNQEAVDIVQNNPHAGIARRMVKTALKAAAKKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDTNMMSRASSVKFPSISVKGGGVSLPHNSLAPCTTTTDNGST 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00530 397 CDD PP2Cc 48 355 IPR001932 -
Vivi2g00530 397 Gene3D - 35 366 IPR036457 -
Vivi2g00530 397 PANTHER PROTEIN PHOSPHATASE 34 353 IPR015655 GO:0004722|GO:0006470
Vivi2g00530 397 Pfam Protein phosphatase 2C 74 324 IPR001932 -
Vivi2g00530 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Vivi2g00530 397 ProSiteProfiles PPM-type phosphatase domain profile. 44 355 IPR001932 -
Vivi2g00530 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Vivi2g00530 397 SMART PP2C_4 41 353 IPR001932 -
Vivi2g00530 397 FunFam Phosphatase 2C family protein 36 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00530 Vivi-Chr2 13643129 13646299 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00530 1 392 PP2C-type Phosphatase Gene Family AT4G38520 73.214 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00530 - - jre:109006616 673.315