Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00492 ATGTTGATGGTGGCGAAGGAAGACAACGAAAGCTGCGGCAGCGGAGTGCACCACCGCACGTCGTCCACGTCATCGGCTCCGTCGCAGAGTCGGCAGCATCGCCAGAAACTCGAAGTGTACGATGAGATTCTTCGCCGGCTCATTTCAACCGGTAACGAAGAAGCTTTGCAGCCTGGATTTAACGATCAGCTTTGGGCTCATTTCAACCGTCTTCCTACACGGTATGCGTTAGATGTGAATGTAGAAAGGGCGGAAGATGTTCTTATGCACAAGAGATTACTTCATTTAGCGCATGATCCTGCTAATAGGCCTTCAATTGAAGTTCACTTAGTCCAGCTTCATCCCTCATCTGATGAAAACCCAGCTGACTCTTTCCAATCATATGCTCCTAGGGTAGATTCTGGTCAAAGCTCTCCTAAATATTCAAGCAGGCAGGGTAGTATATTCCCACCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCACTGGCTCTTGAAGAAAATGATTCTGAAGACTCGGAAGAGGAACGATATGTACATGCAAGTGTACAATATTCACGGCCCATGCATGAAATCACTATCTCAACAGATGACAAGCCAAAGCTTCTCAGCCAGTTAACTGCTTTGCTTGCTGAGGTTGGACTGAACATCCAAGAAGCACATGCTTTTTCCACAACTGATGGTTACTCTTTAGATGTGTTTGTTGTTGAAGGCTGGCCCTATGAGGAAACAGAGAAGCTAAAAGCAACTTTGGAAAAGGAAGTCTTGAAGATTGAGAGACATGAGAGGTCCAGGCGGCAATCAATATCATTTGTTGATGAGTGTGATCAAGCAAGGATGAACAATGAGCTGGATCATTTGAATATTCCAAATGATGGGACAGATGTTTGGGAAATAGATCCCAAACATTTGAAATATGGAACTCAAATTGCATCTGCGTCATACGGTGAACTATTTAAAGGTACATATTGTAGCCAGGAAGTAGCCATCAAAGTTCTCAAGACTGAACATGTAAGTACAGAAATGCAGAAAGAGTTTGCTCAAGAAGTCTACATCATGAGAAAGGTTCGACACAAGAATGTTGTGCAATTCATGGGCGCATGTACCAAGCCCCCAGGCTTATGCATAGTTACAGAGTTTATGTCTGGTGGAAGTGTATATGACTACTTACATAAGCATAAAGGGTGTTTTAAATTTCCTACCCTGCTCAAAGTTGCAATTGATGTTTCTAAAGGAATGAGCTACTTGCACCAACATAACATAATCCACAGAGACTTGAAATCTGCCAATCTTTTGATGGATGAAAATGGTGTTGTAAAGGTTGCCGATTTCGGAGTTGCTAGAGTGAAAGTTCAATCTGGGGTTATGACAGCGGAAACTGGGACTTATCGTTGGATGGCTCCTGAGGTTATTGAACACAAGCCATATGATCACAAGGCGGATGTATTTAGTTTTGGAATTGTTTTATGGGAGTTGCTCACTGGAAAGCTTCCATACGAATATTTGACCCCTCTACAGGCAGCCATAGGAGTTGTTCAGAAGGGTAAACGGCCCGCCATCCCCAAGAGTGCTCATCCAAAGTTTGTTCAGATTCTTGAGAAGTCTTGGCAGCAAGATCCAACATTAAGACCCGATTTCTCTGAAATCATTGAGCTCTTGCAGCAGTTAGCTAAGGAGGTTGGAGATGAAGGAGAGCGCCGGGATAGATCGGGAGGATTTCTGTCTGTCCTCAGACGAGGTCATCACTAA 1749 0.4391 MLMVAKEDNESCGSGVHHRTSSTSSAPSQSRQHRQKLEVYDEILRRLISTGNEEALQPGFNDQLWAHFNRLPTRYALDVNVERAEDVLMHKRLLHLAHDPANRPSIEVHLVQLHPSSDENPADSFQSYAPRVDSGQSSPKYSSRQGSIFPPPAFGSSPNLEALALEENDSEDSEEERYVHASVQYSRPMHEITISTDDKPKLLSQLTALLAEVGLNIQEAHAFSTTDGYSLDVFVVEGWPYEETEKLKATLEKEVLKIERHERSRRQSISFVDECDQARMNNELDHLNIPNDGTDVWEIDPKHLKYGTQIASASYGELFKGTYCSQEVAIKVLKTEHVSTEMQKEFAQEVYIMRKVRHKNVVQFMGACTKPPGLCIVTEFMSGGSVYDYLHKHKGCFKFPTLLKVAIDVSKGMSYLHQHNIIHRDLKSANLLMDENGVVKVADFGVARVKVQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAIGVVQKGKRPAIPKSAHPKFVQILEKSWQQDPTLRPDFSEIIELLQQLAKEVGDEGERRDRSGGFLSVLRRGHH 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00492 582 SUPERFAMILY ACT-like 189 253 IPR045865 -
Vivi2g00492 582 Gene3D - 188 262 - -
Vivi2g00492 582 SUPERFAMILY Protein kinase-like (PK-like) 294 556 IPR011009 -
Vivi2g00492 582 Gene3D Transferase(Phosphotransferase) domain 1 383 570 - -
Vivi2g00492 582 Gene3D Phosphorylase Kinase; domain 1 294 382 - -
Vivi2g00492 582 ProSiteProfiles Protein kinase domain profile. 304 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00492 582 SMART serkin_6 304 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g00492 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Vivi2g00492 582 Pfam Protein tyrosine and serine/threonine kinase 304 553 IPR001245 GO:0004672|GO:0006468
Vivi2g00492 582 CDD ACT_TyrKc 189 256 - -
Vivi2g00492 582 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 101 561 - -
Vivi2g00492 582 MobiDBLite consensus disorder prediction 117 152 - -
Vivi2g00492 582 ProSiteProfiles ACT domain profile. 191 266 IPR002912 -
Vivi2g00492 582 FunFam serine/threonine-protein kinase HT1 383 572 - -
Vivi2g00492 582 CDD STKc_MAP3K-like 310 553 - -
Vivi2g00492 582 PRINTS Tyrosine kinase catalytic domain signature 461 471 IPR001245 GO:0004672|GO:0006468
Vivi2g00492 582 PRINTS Tyrosine kinase catalytic domain signature 480 502 IPR001245 GO:0004672|GO:0006468
Vivi2g00492 582 PRINTS Tyrosine kinase catalytic domain signature 524 546 IPR001245 GO:0004672|GO:0006468
Vivi2g00492 582 PRINTS Tyrosine kinase catalytic domain signature 378 391 IPR001245 GO:0004672|GO:0006468
Vivi2g00492 582 PRINTS Tyrosine kinase catalytic domain signature 415 433 IPR001245 GO:0004672|GO:0006468
Vivi2g00492 582 FunFam Serine/threonine-protein kinase isoform 1 294 382 - -
Vivi2g00492 582 MobiDBLite consensus disorder prediction 115 155 - -
Vivi2g00492 582 MobiDBLite consensus disorder prediction 1 35 - -
Vivi2g00492 582 MobiDBLite consensus disorder prediction 15 33 - -
Vivi2g00492 582 Coils Coil 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00492 Vivi-Chr2 12939382 12946201 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00492 2 581 MAP Kinase Kinase Kinase AT4G35780 63.230 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vivi2g00492 PK_Tyr_Ser-Thr 8.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00492 - - gmx:100805180 941.799