Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00486 ATGGCGGGAGAAGAGAACGACCAAGTCACATATACAGTGAAAGTCACAGTCACTGTCACCATCACAGACGAACCAGTGTCTGATCGATCAAAGGAGTCGGTGGAGAAGAAGGACGAAGAATCAACGATACGTGATGACGTGGCACCAGGAGTCTCTTCCTCTTCTGTTCAAGTTGCTTCGCGTGGTGGAAGTAGTAGGAAAAGAAAGGTCTTATGCGATTCTGAAGAAAGCGAAGCTTCACAAGAGAACGATGAAGGTTCGTTTGCAAGTGATGACGTGGCAACGGTAACTGAACCTATGAACGGTGGCACTGAAACGGTGTCGTTGACGGATAATGAAGATTCGGTTGACGGTTATGATATGGAAGCTGGTGATTCATCTTCTGTTAAATTTGCCGGGAGGACAATGGAGGTCTGCCAGAGAAAGAAACGCGGAAGAACGAACAATGCAGAAATTGTGAATGAGGAAGAAACTGATGAAGACGATGACGTGGCAGACGGAGGCACTTCATCTTTTCAACTGGAGAGAGAAAATGTGAAGAGAGAGAAGAAGAAATCTGGTAGAAAAAGGAAGACTGATTCTAGTTCTGAAGAAAATGGTGAAGCTTCAGAAAAGGGGGAAGATTGTGATTTTGTTAGGGAAGAGAAGAAAACACGTGGTGGAAAAATTCAAATGGAAGAGAATGAAGTGGTCTCTGAAAAGAAGTCTGAGAGTGCTCTGCTGAAGGACAGGAATCAGGACTGTCCGGAAATTGAAACTGAAACGCCTTTGTATAAAGATAATGAATGTTATCCTTTACGAAAAACTAGAAACAAGAAGCCTGCATTAGTTGAACATGTGGTGCCAAAATTCAACAAGAGAAATCCTAAGTGGATTGAAGAGGAGTCCTTAATGTGCCATCAATGTCAGAGAAATGATAGGGGCAGGGTTGTCAGATGCACTAGCTGCAAACGGAAAAGGTTTTGCATACCCTGTATAACTAATTGGTATCCTAACTGGAAAGAGGACAAAATTGCTGAGGAATGCCCGGTGTGCTGTGGTAATTGCAATTGCAAAACATGCTTGCGATCAAGTGTACTTCTCAATGAAACTAAACACAAGACAGAAACCGACAGAGATTATGGGGTTGGTCTCTCCAAGTATATGCTGAAAGAACTTCTTCCGCATTTGAGACGATTGGATGAGGAACAAATGGTCGAGAAGGAGATAGAAGCGAAAACACAAGGGCTCCCACTTTCTGAGCTAACAATAAAAGTAGCAGATTACTCTAAAGATGAGCGTGTGTACTGTGATAACTGCAAAACATCAATATTTGACTACCACAGAAGCTGCACAAAATGTTCTTTTGTCCTTTGTCTCCTCTGTTGCTGTGAGCTTCGTGGTGGGCAGCTTCTAGCCGGTGCAGATCCTATTGAGTTTGAGTTTATCTTTCGAGGACGTGATTATTTGCATGGTGGAGATGAAGAGAAACAAGTCAGAAAAAAAAAACCTCGTTCTGCAGTCCAGCCTGAGATTCATCAATGGTCAAAATCTGGGTGGCATGCAGATACTGACGGTAGCATTCCATGTCCAAAAGCAGATAATGAATGTGATCATGGTTTCCTTGAAATGAGAAGGATACTTCCTCCAAATTGTATCTCCAAGTTAGTATGTAAAGCAGAAAAACTGGAAGAAAAAATTGAGCTTCACGATGCGGAGGAGACTCTTGATAATATGTGTTCATGTTGGAAGTCTGTTAGGAGCGCAGATGGTACCTACAGTAACCTAAGGAAAGCAGCTTTTCGTAAAGATTCTAGTGACAACTTTTTATACTGTCCCAGGGCTGTAGATCTACATCATGAAGATTTAAAACATTTTCAGTGGCATTGGAGCAAAGGGGAGCCTGTAATTATCAGCAATGTACTCGAAAGCTCATCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGTGCATTCCGTCAGATAAGAAATACCAAGCACAAACCAGTTTTGGATGTGAAGGCAATTGATTGCTTAGATTGGTGTGAGGGAGATATTAATTGCCACCAATTCTTTAAGGGGTACACAGAGGGTCGTGTGGATTGGCTTAAATGGCCCCAGGTTTTGAAATTGAAAGATTGGCCTCCTTCTAATTTATTTGAGGAAAGTTTGCCTCGTCATTGTGCCGAGTTCTTATCTTTTCTGCCGTATAAAGATTATACAGATCCTTTCAAAGGTGCTCTCAACCTTGCTGTGAAGTTGCCGAATGGTTGTGTAAAGCCAGACATGGGCCCAAAAACATACATTGCTTATGGATTTGCTCAGGATCTTGGACGCGGTGACTCTGTGACTAAGCTCCATTGTAATATGTCTGATACAGTAAATGTGTTGACTCATATTGCTAAAGTTGAAATCGAACCTGAAAGCATTAGTGCCATCAAGAAACTGACACAAAAACACCTGAAGCAAGACAAAAGGGAGCTACATCTACATGGTAATAATCAGGATGGACTAACCAATGTTAGCATGATTGATAATTCATCGTCTTCCAGAAATGCTTCAGACGGGCAAAATAGAGTTCGAGTCATGGATAATGAAAATGGATTATGCAAGGAGAAGGTGGTTGATCCTGTTCATCAACACTCAGGCGCACATAATGATGGTTTTTCTTCTGGATCAAAGCTCATAGAGGTTGATAAAGTGATTCTGAAAAAAGATAATAGATTGTTGGTTGGAGATGATTCTTTAGATGGTGCTCTCTGGGATATTTTTCGGAGAGAGGACCTACCTAAATTGGAGGAATATCTAAAGAAGCATTTTAGAGAGTTTAGGCATGTCCATTGCTCTCCTTTAAAGCAGGTTATTCACCCCATCCATGATCAGACCTTTTATCTCACTCTGGAGCATAAGAGGAAACTCAAAGAGGAGTATGGAATCGAGCCTTGGACTTTTACTCAGAAGTTAGGAGATGCTGTTCTCGTTCCTGCCGGCTGTCCTCACCAAGTCAGGAATCTCAAGTCATGCATCAAGGTTGGACTTGATTTTGTCTCGCCTGAAAATGTTGGTGAATGCTTCCGTTTGACAGAGGAATTTCGTAAGCTTCCGATAAACCACAGATCCAATGAGGACAAGTTGGAGGTGAAAAGAATGACTATATATGCTATGCTTGATGTGATTGATCAATTGGAGAAAACAAGGTAA 3180 0.4189 MAGEENDQVTYTVKVTVTVTITDEPVSDRSKESVEKKDEESTIRDDVAPGVSSSSVQVASRGGSSRKRKVLCDSEESEASQENDEGSFASDDVATVTEPMNGGTETVSLTDNEDSVDGYDMEAGDSSSVKFAGRTMEVCQRKKRGRTNNAEIVNEEETDEDDDVADGGTSSFQLERENVKREKKKSGRKRKTDSSSEENGEASEKGEDCDFVREEKKTRGGKIQMEENEVVSEKKSESALLKDRNQDCPEIETETPLYKDNECYPLRKTRNKKPALVEHVVPKFNKRNPKWIEEESLMCHQCQRNDRGRVVRCTSCKRKRFCIPCITNWYPNWKEDKIAEECPVCCGNCNCKTCLRSSVLLNETKHKTETDRDYGVGLSKYMLKELLPHLRRLDEEQMVEKEIEAKTQGLPLSELTIKVADYSKDERVYCDNCKTSIFDYHRSCTKCSFVLCLLCCCELRGGQLLAGADPIEFEFIFRGRDYLHGGDEEKQVRKKKPRSAVQPEIHQWSKSGWHADTDGSIPCPKADNECDHGFLEMRRILPPNCISKLVCKAEKLEEKIELHDAEETLDNMCSCWKSVRSADGTYSNLRKAAFRKDSSDNFLYCPRAVDLHHEDLKHFQWHWSKGEPVIISNVLESSSGLSWEPLVMWRAFRQIRNTKHKPVLDVKAIDCLDWCEGDINCHQFFKGYTEGRVDWLKWPQVLKLKDWPPSNLFEESLPRHCAEFLSFLPYKDYTDPFKGALNLAVKLPNGCVKPDMGPKTYIAYGFAQDLGRGDSVTKLHCNMSDTVNVLTHIAKVEIEPESISAIKKLTQKHLKQDKRELHLHGNNQDGLTNVSMIDNSSSSRNASDGQNRVRVMDNENGLCKEKVVDPVHQHSGAHNDGFSSGSKLIEVDKVILKKDNRLLVGDDSLDGALWDIFRREDLPKLEEYLKKHFREFRHVHCSPLKQVIHPIHDQTFYLTLEHKRKLKEEYGIEPWTFTQKLGDAVLVPAGCPHQVRNLKSCIKVGLDFVSPENVGECFRLTEEFRKLPINHRSNEDKLEVKRMTIYAMLDVIDQLEKTR 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00486 1059 MobiDBLite consensus disorder prediction 97 113 - -
Vivi2g00486 1059 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 67 1058 IPR045109 GO:0032454|GO:0033169
Vivi2g00486 1059 MobiDBLite consensus disorder prediction 47 62 - -
Vivi2g00486 1059 MobiDBLite consensus disorder prediction 189 227 - -
Vivi2g00486 1059 MobiDBLite consensus disorder prediction 824 852 - -
Vivi2g00486 1059 Pfam JmjC domain, hydroxylase 912 1008 IPR003347 -
Vivi2g00486 1059 MobiDBLite consensus disorder prediction 826 852 - -
Vivi2g00486 1059 MobiDBLite consensus disorder prediction 23 227 - -
Vivi2g00486 1059 ProSiteProfiles JmjC domain profile. 736 1025 IPR003347 -
Vivi2g00486 1059 SMART cupin_9 717 1025 IPR003347 -
Vivi2g00486 1059 ProSiteProfiles Zinc finger RING-type profile. 299 345 IPR001841 -
Vivi2g00486 1059 Coils Coil 546 566 - -
Vivi2g00486 1059 Gene3D Cupin 603 1034 - -
Vivi2g00486 1059 MobiDBLite consensus disorder prediction 25 45 - -
Vivi2g00486 1059 SUPERFAMILY Clavaminate synthase-like 610 1042 - -
Vivi2g00486 1059 MobiDBLite consensus disorder prediction 136 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00486 Vivi-Chr2 12827274 12833944 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Vivi2g00486 JmjC 1.1e-12 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00486 K15601 - gmx:100780803 1149.42