Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00483 CAACAAACTACGAATTTGAAAGAGGGGATTTTCAAGATGCAATGCCATGTATTGTGCAAGCCAGTTACTACCTTGATTATAGTTAACTTAGCTCTTGCTTTTGTCAATTTACTTCTCAAAATGGTTCTCAATGAAGGAATGGACTACATGTCAATTGTAACATATCGACAAGCAATTTCATTCGTCTTCATGACACCTATTGCATGGTTCTATGAAGGGAAACACAAACTGGAGGCTCGCATAATATGTCTCCTTTTTCTATCTGCTCTTGTCGGAGTAACACTTCCCCAATACCTGTTTCTTCTTGGACTTGGGTATACATCTGCTACAGTCTCATGTGCATTCCTCAACATGGTACCTGTATTTACATTCATCATGTCACTTCCATTTGGGATAGAGAAGGTGAACTTGAAAATCAAGAGTGGCAAAGCCAAAACCTTGGGAGCAATTGTGTGTATTGGTGGAGTTTTGTTGTTAGCCTTTTATAAAGGAATTCCCTTGAACAACCCACAATCTCAACACATAGCACATAGAGATACAAATGGGCCACCAGCTGCAAAGTTAGAGAAATGGATTGTAGGATCAATACTTCTGACTGCAGGTTGCATTTTGTGGTCTTCATGGTTTGTTCTACAAGCAAAGATTAGCAAAAAGTATCCATATCAATACTCTAGCACTGCTATTTTGTCACTTTTTGCTACTATTCAATCAACAATATTAACTTTGGTCATCAAGGGAAAGAATGGCTCATGGATCGTCAAAGGAAAGCTAGAAATAGTGTGTGTAATATATTCTGGATTGGTGGGATCGGGGTTGTGCTATGTCGCAATGTCATGGTGTGTCAAGCAAAGGGGTCCAGTTTTTACTGCAGCATTTACCCCTCTTTTACAAATATTCGTAGCTGTTCTCGATTTCTCAATACTAAAGGAGGAAATATACTTGGGAAGTATTGCAGGATCTGCCTTGGTTATTGTTGGCATGTATATTCTTTTATGGGGAAAAAGTATTGAGGAAGAGCAATATGTCATGAAGGATACACAAGGAAATCAAGATGTAGAATGTCAATGA 1068 0.3858 QQTTNLKEGIFKMQCHVLCKPVTTLIIVNLALAFVNLLLKMVLNEGMDYMSIVTYRQAISFVFMTPIAWFYEGKHKLEARIICLLFLSALVGVTLPQYLFLLGLGYTSATVSCAFLNMVPVFTFIMSLPFGIEKVNLKIKSGKAKTLGAIVCIGGVLLLAFYKGIPLNNPQSQHIAHRDTNGPPAAKLEKWIVGSILLTAGCILWSSWFVLQAKISKKYPYQYSSTAILSLFATIQSTILTLVIKGKNGSWIVKGKLEIVCVIYSGLVGSGLCYVAMSWCVKQRGPVFTAAFTPLLQIFVAVLDFSILKEEIYLGSIAGSALVIVGMYILLWGKSIEEEQYVMKDTQGNQDVECQ 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00483 355 PANTHER WAT1-RELATED PROTEIN 21 343 IPR030184 GO:0016020|GO:0022857
Vivi2g00483 355 Pfam EamA-like transporter family 194 331 IPR000620 GO:0016020
Vivi2g00483 355 Pfam EamA-like transporter family 23 160 IPR000620 GO:0016020
Vivi2g00483 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 163 - -
Vivi2g00483 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 258 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00483 Vivi-Chr2 12725141 12727025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00483 18 265 Nodulin-like Gene Family AT3G30340 44.400 1.65e-71 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00483 - - gmx:100802053 548.895