Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00464 ATGTCTAACACCGACGGAACTCCAACAACCACTAACGGCTCCATCATTGACCCTCACCGTCAACAGTTAGCCGTCAAGAAACCGCCGTCAAAAGACCGTCACAGCAAAGTAGACGGCCGAGGCCGCCGTATTCGCATGCCAATCATATGCGCCGCACGCGTCTTCCAACTCACCCGCGAATTAGGTCACAAATCCGATGGTCAAACCATCGAGTGGCTCCTCCGTCAAGCTGAACCCTCCATCATCGCCGCCACCGGGACAGGAACTACTCCGGCGAGTTTCTCCTCTCTCTCCGTTTCACTTCGCGGCTCCAACAATTCTCTCCCCTCTCCTTCCTCCACTTCGCTTGACCATAAACCGCTTCTCTCTCCCTCTCCTTTCATTCTCGGGAAACGTATACGCACCGATGACGATTCGTCTTCTCCGTCGGGGAACAACGCGAAAGACGACGCGCTTTCTGTTGCTTCTCTTTCTACACCGGCTGCTCTTTGGGCGTTACCTACACGGCCTGATTTTGGTCAAATTTGGAGCTTCGCTGCCGCGGCTGCTGCTGCTCCTCCGCCGGAAATGGTGGTTCAGTCTATGTCTCAGCAGCAGCATCAGCATCAAGCGAATTTCTTCGCTCATCATCATCAGCAGCAACACCAGCAGCAACAAGCTATGGGAGAAGCCTCGGCTGCTAGAGTTGGGAATTATCTTCCTGGACATTTGAATTTGCTTGCTTCCTTGTCTGGTGGACATGGAAATTCCGGTCGGAGAGACGATGAACATCATTGA 777 0.5341 MSNTDGTPTTTNGSIIDPHRQQLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSLSVSLRGSNNSLPSPSSTSLDHKPLLSPSPFILGKRIRTDDDSSSPSGNNAKDDALSVASLSTPAALWALPTRPDFGQIWSFAAAAAAAPPPEMVVQSMSQQQHQHQANFFAHHHQQQHQQQQAMGEASAARVGNYLPGHLNLLASLSGGHGNSGRRDDEHH 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00464 258 MobiDBLite consensus disorder prediction 99 120 - -
Vivi2g00464 258 MobiDBLite consensus disorder prediction 24 42 - -
Vivi2g00464 258 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 230 IPR005333 GO:0003700
Vivi2g00464 258 Pfam TCP family transcription factor 30 214 IPR017887 -
Vivi2g00464 258 MobiDBLite consensus disorder prediction 23 42 - -
Vivi2g00464 258 MobiDBLite consensus disorder prediction 99 151 - -
Vivi2g00464 258 ProSiteProfiles TCP domain profile. 30 84 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00464 Vivi-Chr2 12508117 12510175 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00464 5 256 TCP Transcription Factor Family AT5G23280 63.424 2.40e-97 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vivi2g00464 TCP 4.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00464 K16221 - qsa:O6P43_020036 318.161