Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00437 ATGGCGGAGGAACACAACAACACCACAACCGCACTCACAGAAGATTCCATCCCCGATCATCCAGAAATAACTGAAACACCCGAAACGGTGTCGTTCAAAGTCAATGACGTGGCAAAGGATGCGAATGCTGTATCAGAAACGGCGTCGTTGAAGGAAGCAGAAGAAGGTATGGATATTGTTGCCGAAACGGCGTCGTTGAAGGACGGTTTAGGTTCGGTTGAAGGTGATGACGTGGCAGCTGGAGATTCACCTACCGTCGTAGAGCCGATAAAGAAGTATCACAGAAGGAGGAATAAACCTGGAGGAAAGAGTAATGTAGAAATCGAAGCGTTGAAGAATGAACCAAACGGAGAAGAAACGGTTAAAGCTGATGACGTGGCAGGTGGTGGCTCTGACTCTGTTCCGCCAGAGAAGAAGAAGAAACGCGGCGTAAAGAGGAAGACGGAGAAGGAAGGTGAAGCTGTTGAAGGTGATGATGTGGCGGTGGCGGTTGTAGGTTCGTCTTCTGTTGAGGGGACTGTGAGGAAGAGTGAACGTCCTAGGAAGATTAAATCGTTTGCGGAGGATTTTGTGTCAGTGTTGGATGCGGAAGTGACGAAGAATGGGAATTGTAAAAGGAAGAAGGCGATAATAGATGTTTTTGATGCGAATAATGCTGTACAAGAAGGGGAAGATGTGAAGGAAGAGAAGAAGAAACCTGGTAGAAAAAGGAAGAATGATTTTAGTTCTGAAGAAGATTATAAAGGTGCAGTAGGTGGGGAAAGTGTGAAGAAAGAGAAGAAAAAACCTGGTGGTAGAAGAAAGAAGAATGGTTATAGTTCTGAAGACGAATGCAAACCTGAACTAGATGATGAAAATGTGAAGAAAAAAAATAAGAAACTTGGTAGAAAAAGTAAGAAAGTTTATAGTTCTGGAGAAGAATATAAAGCTGTAGTTGATAGCGAAAATGTAAAGAAAGAAACGGAGAAACCTGGTAGAAAAAGAAGGACAGTTTCTATTTCTGTAGAAAATGGTGAAGCTGCAGAAGAGGGGGAAAACGGTGGTTTTGACAAGGAAGAGAAGAAAACACCTGGTCGAAAAATTAAGATCGAAGATAATGAACTGGTCTCTGAAAAGAAGTCTAAGAGTGTTGTGCTGAAGGATGAGATACAGGACTGTCCTGAAATTGAAACTGAAACGCCCGTGTATATTGATAATAAAGGTTATTCTTTGCGTAAGACTAGAAACACGAAACCTACATTAGTTGAACATGTGGTGCCAAAAATCAACAAGAAAAACCCTAAGCGGATTGAAAAGGAGTCTTTAATGTGCCATCAATGTCAGAGAAATGATAAGGGCAGGGTAGTCAGATGCACTAGCTGCAAAAGGAAAAGATTTTGCATACACTGTATAACTAATTGGTATCCTAACTGGAAAGAGGATGAAATTGCTGAGAAATGTCCGGTGTGCTGTGGTAATTGCAATTGCAAATCATGCCTGCGATCACGTGTTCTTATCAATGCAATTAAAGAAAAGACAGAAACCAACGAAGATCCTGAGGTTGGGCCCTCCAAGTATATGCTAAAAGAACTTCTTCCGTATTTAATACGATTGGATGAGGAACAAATGACCGAGAAGGAGATAGAAGCAAAAAGACAAGGGCTTCCACTATCGGAGCTAAAAATAAAAGTAGCAGAGTACTCTAAAAATGAGCGCGTGTACTGTGATAACTGCAAAACATCAATATTTGACTACCACCGAAGCTGTACAAAATGCTCATTTGACATCTGTCTCCTCTGTTGCTGTGAGCTTCGTGGTGGCAAGCTTCTAGGTGGCGATGATCCAATTGAGTTTGAGTTTATCTTCCGAGGGCGTGAATATCTACATGGCGGAGATGAAAAGAAACAAGATAGAAAAGAAAACCCTCGTTCTGCAGTCCAGCTTGAGATTTGTGAATGGTCTAAATCTGGGTGGCGTGCAGATACTGATGGTAGCATTCCCTGTCCAAAGACCAATAATGATTGTGACCATGGTTTCCTTGAACTGAGAAGCATACTTCAGCCAAATTGCATATCTGAGTTAGTATCCAAAGCAAAAGAACTTGTAGAGGAAGCAATGGAACTTCAAGATGCAGAGGAGAATCTTGATGATAGGTGTTCTTGTTTGAAGCCTGTTAGGAATTCAGATGATATACACAATAACACAAGGAAGGCAGCTTTTCGTGAAGATTCTAGCGACAACTTTTTATATTGTCCTAGGGCTGTAGATCTACGTCAGGAGGATTTAAGACATTTTCAATCACACTGGAGCAAAGGGGAGCCTGTAATTGTCAGCAATGTACTTGAATGTACATCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGTGCATTCCGTCAGATAAGCAACACTAAGCATAAAACACTTTTGGATGTGAAGGCAATTGATTGCTTGGATTGGTGTGAGGGAGATATTAATGTGCACCAATTCTTTACTGGGTACACAGAGGGTCGTGTGGATTGGCTTAAATGGCCTCAGGTTTTGAAACTGAAAGATTGGCCTCCTTCTAATTTATTTGAGGAAAGTTTGCCTCGTCATTGTGCCGAGTTCATATATTCTTTGCCGTATAAAGAGTATACAGATCCTTTCAAAGGTGCTCTTAACCTTGCTGTGAAGTTGCCTAAAGGTGTTCTAAAGCCAGACATGGGCCCAAAAACATACATTGCTTATGGATTTGCTCAAGAACTTGGGCGGGGTGATTCTGTGACTAAGCTCCATTGTGATATGTCTGATGCAGTAAATGTGTTGACTCATATTGCTAAAGTTGAATTGAAAGATAAGAGCATTGAGGCCATCAAGAAACTGACACGAAAGCACCTCAAGCAAGACAAAAGGGAGCTACATCTACATGGTGATAATCAGGATGGACAAACCAATGCTAGCATGCTTGATAATTCATCGTCTTCCATAAATGCATCAGACGATGAGAAGGTGACTGATCCTGTTCATCATCACTCAGGTGCAGATAATGATGGCCTTTCTTCTGGATCAAAGCTCAAAAAGGTCGATAAAGTGATTGTGAAAAAAGGTAATAGTTTGTTGGCTGGGGATGATTCTTTAGATGGTGCTCTTTGGGATATTTTTCGGAGAGAGGATGTCCCGAAATTGGAGGAATATCTAAAGAATCATTTTAGAGAGTTCAGGCATGCCCATTGCTCTCCTTTAAAGCAGGTTATTCACCCCATCCACGATCAGACCTTTTATTTGACTATTGCACATAAAAAGAGACTGAAGGAGGAGTATGGAATTGAGCCCTGGACTTTTGTTCAGAAGCTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCCCACCAAGTCCGTAATCTGAAGTCATGCACCAAGGTTGCTCTTGACTTTGTCTCTCCAGAAAATGTCGGCGAGTGCTTTCGCTTGACAGAGGAGTTCCGCAAACTTCCAGTAAATCACAAGTCCACAGAGGACAAATTGGAGGTGAAGAAAATGATTATATATGCGATGCTTGACCTGGTCAAAACCTTGGAGAAAGCAAGGTCTGGGGAAACTGGAGAAACTAAGGTTCCAGTGTAA 3585 0.419 MAEEHNNTTTALTEDSIPDHPEITETPETVSFKVNDVAKDANAVSETASLKEAEEGMDIVAETASLKDGLGSVEGDDVAAGDSPTVVEPIKKYHRRRNKPGGKSNVEIEALKNEPNGEETVKADDVAGGGSDSVPPEKKKKRGVKRKTEKEGEAVEGDDVAVAVVGSSSVEGTVRKSERPRKIKSFAEDFVSVLDAEVTKNGNCKRKKAIIDVFDANNAVQEGEDVKEEKKKPGRKRKNDFSSEEDYKGAVGGESVKKEKKKPGGRRKKNGYSSEDECKPELDDENVKKKNKKLGRKSKKVYSSGEEYKAVVDSENVKKETEKPGRKRRTVSISVENGEAAEEGENGGFDKEEKKTPGRKIKIEDNELVSEKKSKSVVLKDEIQDCPEIETETPVYIDNKGYSLRKTRNTKPTLVEHVVPKINKKNPKRIEKESLMCHQCQRNDKGRVVRCTSCKRKRFCIHCITNWYPNWKEDEIAEKCPVCCGNCNCKSCLRSRVLINAIKEKTETNEDPEVGPSKYMLKELLPYLIRLDEEQMTEKEIEAKRQGLPLSELKIKVAEYSKNERVYCDNCKTSIFDYHRSCTKCSFDICLLCCCELRGGKLLGGDDPIEFEFIFRGREYLHGGDEKKQDRKENPRSAVQLEICEWSKSGWRADTDGSIPCPKTNNDCDHGFLELRSILQPNCISELVSKAKELVEEAMELQDAEENLDDRCSCLKPVRNSDDIHNNTRKAAFREDSSDNFLYCPRAVDLRQEDLRHFQSHWSKGEPVIVSNVLECTSGLSWEPLVMWRAFRQISNTKHKTLLDVKAIDCLDWCEGDINVHQFFTGYTEGRVDWLKWPQVLKLKDWPPSNLFEESLPRHCAEFIYSLPYKEYTDPFKGALNLAVKLPKGVLKPDMGPKTYIAYGFAQELGRGDSVTKLHCDMSDAVNVLTHIAKVELKDKSIEAIKKLTRKHLKQDKRELHLHGDNQDGQTNASMLDNSSSSINASDDEKVTDPVHHHSGADNDGLSSGSKLKKVDKVIVKKGNSLLAGDDSLDGALWDIFRREDVPKLEEYLKNHFREFRHAHCSPLKQVIHPIHDQTFYLTIAHKKRLKEEYGIEPWTFVQKLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENVGECFRLTEEFRKLPVNHKSTEDKLEVKKMIIYAMLDLVKTLEKARSGETGETKVPV 1194
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00437 1194 MobiDBLite consensus disorder prediction 1 15 - -
Vivi2g00437 1194 MobiDBLite consensus disorder prediction 1 27 - -
Vivi2g00437 1194 SUPERFAMILY Clavaminate synthase-like 754 1173 - -
Vivi2g00437 1194 MobiDBLite consensus disorder prediction 956 1008 - -
Vivi2g00437 1194 ProSiteProfiles Zinc finger RING-type profile. 437 483 IPR001841 -
Vivi2g00437 1194 MobiDBLite consensus disorder prediction 268 291 - -
Vivi2g00437 1194 MobiDBLite consensus disorder prediction 966 988 - -
Vivi2g00437 1194 Coils Coil 684 711 - -
Vivi2g00437 1194 MobiDBLite consensus disorder prediction 221 260 - -
Vivi2g00437 1194 SMART cupin_9 856 1149 IPR003347 -
Vivi2g00437 1194 Gene3D Cupin 744 1158 - -
Vivi2g00437 1194 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 144 1184 IPR045109 GO:0032454|GO:0033169
Vivi2g00437 1194 MobiDBLite consensus disorder prediction 217 357 - -
Vivi2g00437 1194 Pfam JmjC domain, hydroxylase 1034 1132 IPR003347 -
Vivi2g00437 1194 ProSiteProfiles JmjC domain profile. 875 1149 IPR003347 -
Vivi2g00437 1194 MobiDBLite consensus disorder prediction 299 333 - -
Vivi2g00437 1194 MobiDBLite consensus disorder prediction 69 155 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi2g00437 Vivi-Chr2 12096764 12110271 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Vivi2g00437 JmjC 2.6e-15 CL0029
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00437 K15601 - gmx:100805723 1121.3