Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g00380 ATGGAAGAGAGGTTGAGTTCATCAACAACAATCCACTCTTCCAATATAGGGTTTCAGCTATTGAAGAAGCAGGGTTGGAAAGAAGGCACTGGGCTTGGAATCTCTGAGCAGGGTAGATTAGAACCTGTGGAAACTCATGTGAAGAATAATAAGCGAGGTTTGGGAGCAGATAAAGTGAAGAAAAAGATAGTGAAACCTGATCGTGGTGCTGATTCCTCTAAAGGAGACAATAAGCTGGAAGATTTGTCTAAAAAGAAAACCAAAGCACTTTCTAAACGGATGAGAAAGATGCAGGAGTTAGAAAAGAAGATGCAGGAGAAGGAATTTGAGCGCGCTTTCTTTAGAGAGTTCTGGCCTGACAATGTATGA 369 0.4146 MEERLSSSTTIHSSNIGFQLLKKQGWKEGTGLGISEQGRLEPVETHVKNNKRGLGADKVKKKIVKPDRGADSSKGDNKLEDLSKKKTKALSKRMRKMQELEKKMQEKEFERAFFREFWPDNV 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g00380 122 Coils Coil 87 110 - -
Vivi2g00380 122 ProSiteProfiles G-patch domain profile. 13 59 IPR000467 GO:0003676
Vivi2g00380 122 MobiDBLite consensus disorder prediction 44 99 - -
Vivi2g00380 122 SMART G-patch_5 11 57 IPR000467 GO:0003676
Vivi2g00380 122 PANTHER BAT4 PROTEIN-RELATED 6 122 IPR039146 -
Vivi2g00380 122 Pfam G-patch domain 14 56 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g00380 Vivi-Chr2 11387889 11390752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g00380 3 55 C2H2 Transcription Factor Family AT5G26610 49.057 3.28e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g00380 - - cam:101497292 190.66